Alignments for a candidate for trpD_1 in Desulfobacca acetoxidans DSM 11109

Align anthranilate synthase (subunit 2/2) (EC 4.1.3.27) (characterized)
to candidate WP_148231245.1 DESAC_RS12815 aminodeoxychorismate/anthranilate synthase component II

Query= BRENDA::P20576
         (201 letters)



>NCBI__GCF_000195295.1:WP_148231245.1
          Length = 219

 Score =  181 bits (458), Expect = 1e-50
 Identities = 101/194 (52%), Positives = 129/194 (66%), Gaps = 7/194 (3%)

Query: 2   LLMIDNYDSFTYNLVQYFGELKAEVKVVRNDELSVEQIEALAPERIVLSPGPCTPNEAGV 61
           L++IDNYDSFTYNLVQ F E + EV V R+D++S+ Q+EAL P+ + +SPGP  P +AG+
Sbjct: 3   LVIIDNYDSFTYNLVQLFFEFELEVMVFRHDQVSLNQLEALRPDWLCISPGPKAPQDAGL 62

Query: 62  SLAVIERFAGKLPLLGVCLGHQSIGQAFGGEVVRARQVMHGKTSPIHHKDLGVFAGLANP 121
           S AVI  F   LP+LGVCLG Q+I + FGG    A   +HGK   I H+ +G+F GL  P
Sbjct: 63  SKAVIAHFYKTLPILGVCLGMQAINEVFGGVTEPAPVPVHGKRHQIFHQGIGLFKGLPCP 122

Query: 122 LTVTRYHSLVVKRESLPECLEVTAWTQHADGSLDEIMGVRHKTLNVEGVQFHPESILTEQ 181
               RYHSL+V+  S  + L VTA++  ADG    IMG+ H +  + GVQFHPES LTE 
Sbjct: 123 FWAARYHSLMVRPAS--KELMVTAYS--ADG---VIMGLSHWSYPLHGVQFHPESFLTEY 175

Query: 182 GHELLANFLRQQGG 195
           G EL ANFLR   G
Sbjct: 176 GRELAANFLRLAPG 189


Lambda     K      H
   0.319    0.137    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 155
Number of extensions: 8
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 219
Length adjustment: 21
Effective length of query: 180
Effective length of database: 198
Effective search space:    35640
Effective search space used:    35640
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)

Align candidate WP_148231245.1 DESAC_RS12815 (aminodeoxychorismate/anthranilate synthase component II)
to HMM TIGR00566 (glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase)

Software error:

../bin/blast/fastacmd -i /tmp/list.591.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.591.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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