GapMind for Amino acid biosynthesis

 

Protein WP_234803296.1 in Rhodopseudomonas palustris CGA009

Annotation: NCBI__GCF_000195775.1:WP_234803296.1

Length: 337 amino acids

Source: GCF_000195775.1 in NCBI

Candidate for 3 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-isoleucine biosynthesis leuB med D-malate dehydrogenase (decarboxylating) (EC 1.1.1.83) (characterized) 65% 94% 464.9 L-tartrate dehydrogenase/D-malate dehydrogenase (decarboxylating)/meso-tartrate decarboxylase monomer (EC 1.1.1.83; EC 1.1.1.93) 76% 553.1
L-leucine biosynthesis leuB med D-malate dehydrogenase (decarboxylating) (EC 1.1.1.83) (characterized) 65% 94% 464.9 L-tartrate dehydrogenase/D-malate dehydrogenase (decarboxylating)/meso-tartrate decarboxylase monomer (EC 1.1.1.83; EC 1.1.1.93) 76% 553.1
L-lysine biosynthesis hicdh med homoisocitrate dehydrogenase (EC 1.1.1.87) (characterized) 40% 94% 216.9 L-tartrate dehydrogenase/D-malate dehydrogenase (decarboxylating)/meso-tartrate decarboxylase monomer (EC 1.1.1.83; EC 1.1.1.93) 76% 553.1

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000195775.1

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