Alignments for a candidate for ilvC in Tistlia consotensis USBA 355

Align acetohydroxyacid isomeroreductase (EC 1.1.1.86) (characterized)
to candidate WP_268810736.1 B9O00_RS01965 ketol-acid reductoisomerase

Query= metacyc::MONOMER-18814
         (338 letters)



>NCBI__GCF_900177295.1:WP_268810736.1
          Length = 349

 Score =  453 bits (1166), Expect = e-132
 Identities = 221/339 (65%), Positives = 268/339 (79%), Gaps = 1/339 (0%)

Query: 1   MKVFYDKDADLSLIKGKNVTIIGYGSQGHAHALNLKDSGVN-VTVGLRKSGASWNKAANA 59
           M+V+YD+DAD +LIKGK V I+GYGSQGHAHA+NL+DSGV  V + LR+  A+  KA NA
Sbjct: 11  MRVYYDRDADANLIKGKKVVIVGYGSQGHAHAMNLRDSGVTEVAIALREGSATRKKAENA 70

Query: 60  GLQVKEVAEAVKGADVVMILLPDEQIADVYKNEVHDNIKEGAALAFAHGFNVHYGAVIPR 119
           G +V   AE  K  DV+M+L PDE  AD+YK+++  N+KEGAAL FAHG NVH+  + PR
Sbjct: 71  GFKVMTPAEGAKWGDVIMMLTPDELQADIYKDDLAPNMKEGAALTFAHGLNVHFNLIEPR 130

Query: 120 ADLDVIMIAPKAPGHTVRATYTQGGGVPHLIAVHQNKSGAARDIALSYATANGGGRAGII 179
            D+DV MIAPK PGHTVR+ Y +GGGVP LIAV Q+ SG A ++ LSYA A GG RAG+I
Sbjct: 131 PDIDVFMIAPKGPGHTVRSEYLRGGGVPCLIAVAQDASGNAHELGLSYAAAIGGARAGVI 190

Query: 180 ETNFREETETDLFGEQAVLCGGTVELIKAGFETLVEAGYAPEMAYFECLHELKLIVDLIY 239
           ET F+EE ETDLFGEQ VLCGG  ELI AGFETLVEAGYAPEMAYFECLHE+KLIVDL+Y
Sbjct: 191 ETTFKEECETDLFGEQVVLCGGLCELITAGFETLVEAGYAPEMAYFECLHEVKLIVDLMY 250

Query: 240 EGGIANMNYSISNNAEYGEYVTGPRVVTEETKKAMKQCLTDIQTGEYAKSFLLENKAGAP 299
           EGG+A M YSISN AEYG+Y  GPR++TEET+  MK+ L DIQ G +A+ ++LE KAG P
Sbjct: 251 EGGMATMRYSISNTAEYGDYTRGPRIITEETRAEMKRVLADIQEGRFARDWVLECKAGQP 310

Query: 300 TLISRRRLTAEHQIEEVGAKLRAMMPWIAKNKMVDQSKN 338
           +  + RR  AEHQIEEVGAKLRAMMPWI++  +VD++KN
Sbjct: 311 SFKAMRRRNAEHQIEEVGAKLRAMMPWISEKALVDKTKN 349


Lambda     K      H
   0.316    0.133    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 423
Number of extensions: 18
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 349
Length adjustment: 29
Effective length of query: 309
Effective length of database: 320
Effective search space:    98880
Effective search space used:    98880
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)

Align candidate WP_268810736.1 B9O00_RS01965 (ketol-acid reductoisomerase)
to HMM TIGR00465 (ilvC: ketol-acid reductoisomerase (EC 1.1.1.86))

Software error:

../bin/blast/fastacmd -i /tmp/list.9455.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.9455.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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