Alignments for a candidate for cysE in Desulfurobacterium atlanticum DSM 15668

Align Serine acetyltransferase; SAT; EC 2.3.1.30 (characterized)
to candidate WP_274534100.1 CHB58_RS07420 serine O-acetyltransferase

Query= SwissProt::Q06750
         (217 letters)



>NCBI__GCF_900188395.1:WP_274534100.1
          Length = 231

 Score =  245 bits (626), Expect = 4e-70
 Identities = 126/216 (58%), Positives = 154/216 (71%), Gaps = 5/216 (2%)

Query: 1   MFFRMLKEDIDTVFDQDPAARSYFEVILTYSGLHAIWAHRIAHALYKRKFYFLARLISQV 60
           +    L+EDI TVF++DPAARS  EVI  Y GLHA+W HRIAH L+ +     ARLIS  
Sbjct: 16  LMLNRLREDISTVFERDPAARSILEVITCYPGLHAVWMHRIAHWLWNKNLKLPARLISHF 75

Query: 61  SRFFTGIEIHPGATIGRRFFIDHGMGVVIGETCEIGNNVTVFQGVTLGGTGKEKGKRHPT 120
           +R+ TGIEIHPGA IGRRFFIDHGMGVVIGET EIGN+VT++  VTLGGT   KGKRHPT
Sbjct: 76  ARWITGIEIHPGAKIGRRFFIDHGMGVVIGETTEIGNDVTIYHQVTLGGTSTHKGKRHPT 135

Query: 121 IKDDALIATGAKVLGSITVGEGSKIGAGSVVLHDVPDFSTVVGIPGRVVVQNG-KKVRRD 179
           I ++ +I  GAK+LG I +G+  KIGA SVV+ DVP  STVVGIPG++V ++G +  R D
Sbjct: 136 IGNNVVIGAGAKILGPIKIGDNCKIGANSVVVKDVPPNSTVVGIPGKIVKRDGIRTTRVD 195

Query: 180 LNHQDLPDPVADRFKSLEQQI----LELKAELEDRK 211
           L H  LPDPV +  K +   I    LE+K   ED+K
Sbjct: 196 LEHGQLPDPVMETLKQMLDIIHFLELEIKTLKEDKK 231


Lambda     K      H
   0.323    0.141    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 231
Number of extensions: 13
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 231
Length adjustment: 22
Effective length of query: 195
Effective length of database: 209
Effective search space:    40755
Effective search space used:    40755
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 46 (22.3 bits)

Align candidate WP_274534100.1 CHB58_RS07420 (serine O-acetyltransferase)
to HMM TIGR01172 (cysE: serine O-acetyltransferase (EC 2.3.1.30))

Software error:

../bin/blast/fastacmd -i /tmp/list.16551.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.16551.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.