GapMind for Amino acid biosynthesis

 

Protein WP_011610169.1 in Trichodesmium erythraeum IMS101

Annotation: NCBI__GCF_000014265.1:WP_011610169.1

Length: 390 amino acids

Source: GCF_000014265.1 in NCBI

Candidate for 10 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-phenylalanine biosynthesis PPYAT hi aspartate transaminase (EC 2.6.1.1) (characterized) 74% 100% 589.3
L-tyrosine biosynthesis tyrB hi aspartate transaminase (EC 2.6.1.1) (characterized) 74% 100% 589.3
L-phenylalanine biosynthesis ptransferase hi Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 (characterized) 48% 97% 360.1
L-tyrosine biosynthesis ptransferase hi Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 (characterized) 48% 97% 360.1
L-lysine biosynthesis lysN med Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 (characterized) 41% 95% 319.3 aspartate transaminase (EC 2.6.1.1) 74% 589.3
L-lysine biosynthesis dapX lo Probable N-acetyl-LL-diaminopimelate aminotransferase; Putative aminotransferase A; EC 2.6.1.- (characterized) 37% 95% 261.2 aspartate transaminase (EC 2.6.1.1) 74% 589.3
glycine biosynthesis agx1 lo alanine—glyoxylate transaminase (EC 2.6.1.44) (characterized) 33% 100% 241.1 aspartate transaminase (EC 2.6.1.1) 74% 589.3
L-valine biosynthesis ilvE lo Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 (characterized) 31% 99% 193 aspartate transaminase (EC 2.6.1.1) 74% 589.3
L-lysine biosynthesis dapC lo succinyldiaminopimelate transaminase (EC 2.6.1.17) (characterized) 30% 96% 175.3 aspartate transaminase (EC 2.6.1.1) 74% 589.3
L-histidine biosynthesis hisC lo Histidinol-phosphate aminotransferase 2; EC 2.6.1.9; Imidazole acetol-phosphate transaminase 2 (uncharacterized) 30% 84% 121.7 aspartate transaminase (EC 2.6.1.1) 74% 589.3

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000014265.1

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