GapMind for Amino acid biosynthesis

 

Protein WP_012473666.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_012473666.1

Length: 431 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 10 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-phenylalanine biosynthesis PPYAT lo Beta-phenylalanine transaminase; Aromatic beta-amino acid aminotransferase; Beta-phenylalanine aminotransferase; VpAT; EC 2.6.1.- (characterized) 33% 91% 203.8 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) 57% 483.0
L-tyrosine biosynthesis tyrB lo Beta-phenylalanine transaminase; Aromatic beta-amino acid aminotransferase; Beta-phenylalanine aminotransferase; VpAT; EC 2.6.1.- (characterized) 33% 91% 203.8 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) 57% 483.0
L-arginine biosynthesis argD lo 4-aminobutyrate aminotransferase GabT; 5-aminovalerate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.48 (characterized) 32% 91% 176 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) 57% 483.0
L-proline biosynthesis argD lo 4-aminobutyrate aminotransferase GabT; 5-aminovalerate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.48 (characterized) 32% 91% 176 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) 57% 483.0
L-arginine biosynthesis lysJ lo [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) (characterized) 33% 76% 154.8 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) 57% 483.0
L-lysine biosynthesis lysJ lo [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) (characterized) 33% 76% 154.8 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) 57% 483.0
L-proline biosynthesis lysJ lo [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) (characterized) 33% 76% 154.8 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) 57% 483.0
L-lysine biosynthesis lysN lo 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; L-2AA aminotransferase; EC 2.6.1.39 (characterized) 34% 82% 154.1 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) 57% 483.0
L-arginine biosynthesis argD'B lo succinylornithine transaminase (EC 2.6.1.81) (characterized) 33% 76% 148.3 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) 57% 483.0
L-lysine biosynthesis dapC lo Acetylornithine/succinyldiaminopimelate aminotransferase; ACOAT; DapATase; Succinyldiaminopimelate transferase; EC 2.6.1.11; EC 2.6.1.17 (uncharacterized) 32% 78% 142.5 glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) 57% 483.0

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

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