GapMind for Amino acid biosynthesis

 

Protein WP_012473930.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_012473930.1

Length: 260 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 3 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-histidine biosynthesis hisA hi 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (characterized) 40% 92% 200.7
L-histidine biosynthesis hisA hi hisA: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase (EC 5.3.1.16) (TIGR00007) 100% 283.8
L-tryptophan biosynthesis PRAI med phosphoribosylanthranilate isomerase (EC 5.3.1.24) (characterized) 36% 95% 147.1
L-histidine biosynthesis hisF lo Imidazole glycerol phosphate synthase subunit HisF; EC 4.3.2.10; IGP synthase cyclase subunit; IGP synthase subunit HisF; ImGP synthase subunit HisF; IGPS subunit HisF (uncharacterized) 30% 97% 107.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) 40% 200.7

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

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