GapMind for Amino acid biosynthesis

 

Protein WP_012474535.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_012474535.1

Length: 402 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 9 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-phenylalanine biosynthesis PPYAT hi Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 (characterized) 76% 99% 615.1
L-phenylalanine biosynthesis ptransferase hi Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 (characterized) 76% 99% 615.1
L-tyrosine biosynthesis ptransferase hi Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 (characterized) 76% 99% 615.1
L-tyrosine biosynthesis tyrB hi Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 (characterized) 76% 99% 615.1
L-lysine biosynthesis lysN med Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 (characterized) 48% 99% 357.1 Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 76% 615.1
L-lysine biosynthesis dapX lo Probable N-acetyl-LL-diaminopimelate aminotransferase; Putative aminotransferase A; EC 2.6.1.- (characterized) 39% 94% 248.4 Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 76% 615.1
glycine biosynthesis agx1 lo alanine—glyoxylate transaminase (EC 2.6.1.44) (characterized) 34% 99% 227.3 Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 76% 615.1
L-methionine biosynthesis metC lo kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) (characterized) 31% 87% 169.1 Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 76% 615.1
L-histidine biosynthesis hisC lo Histidinol-phosphate aminotransferase 2; EC 2.6.1.9; Imidazole acetol-phosphate transaminase 2 (uncharacterized) 30% 54% 80.5 Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 76% 615.1

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

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