GapMind for Amino acid biosynthesis

 

Protein WP_012474685.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_012474685.1

Length: 404 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 4 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
glycine biosynthesis agx1 med alanine-glyoxylate transaminase (EC 2.6.1.44) (characterized) 54% 98% 438.7 Glutamate-pyruvate aminotransferase AlaC; EC 2.6.1.2 56% 468.4
L-phenylalanine biosynthesis PPYAT med aspartate transaminase (EC 2.6.1.1) (characterized) 42% 96% 345.5 Glutamate-pyruvate aminotransferase AlaC; EC 2.6.1.2 56% 468.4
L-tyrosine biosynthesis tyrB med aspartate transaminase (EC 2.6.1.1) (characterized) 42% 96% 345.5 Glutamate-pyruvate aminotransferase AlaC; EC 2.6.1.2 56% 468.4
L-lysine biosynthesis DAPtransferase med LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 (characterized) 42% 98% 339.7 Glutamate-pyruvate aminotransferase AlaC; EC 2.6.1.2 56% 468.4

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

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