GapMind for Amino acid biosynthesis

 

Protein WP_012475114.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_012475114.1

Length: 330 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 3 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-isoleucine biosynthesis ilvC hi Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 (characterized) 59% 97% 415.2
L-isoleucine biosynthesis ilvC hi ilvC: ketol-acid reductoisomerase (EC 1.1.1.86) (TIGR00465) 99% 457.3
L-leucine biosynthesis ilvC hi Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 (characterized) 59% 97% 415.2
L-leucine biosynthesis ilvC hi ilvC: ketol-acid reductoisomerase (EC 1.1.1.86) (TIGR00465) 99% 457.3
L-valine biosynthesis ilvC hi Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 (characterized) 59% 97% 415.2
L-valine biosynthesis ilvC hi ilvC: ketol-acid reductoisomerase (EC 1.1.1.86) (TIGR00465) 99% 457.3

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

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