GapMind for Amino acid biosynthesis

 

Protein WP_041471663.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_041471663.1

Length: 339 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 4 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
chorismate biosynthesis asd hi Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 (characterized) 52% 99% 321.2 USG-1 protein 38% 210.7
chorismate biosynthesis asd hi asd: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (TIGR01296) 99% 442.8 USG-1 protein 38% 210.7
L-lysine biosynthesis asd hi Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 (characterized) 52% 99% 321.2 USG-1 protein 38% 210.7
L-lysine biosynthesis asd hi asd: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (TIGR01296) 99% 442.8 USG-1 protein 38% 210.7
L-methionine biosynthesis asd hi Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 (characterized) 52% 99% 321.2 USG-1 protein 38% 210.7
L-methionine biosynthesis asd hi asd: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (TIGR01296) 99% 442.8 USG-1 protein 38% 210.7
L-threonine biosynthesis asd hi Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 (characterized) 52% 99% 321.2 USG-1 protein 38% 210.7
L-threonine biosynthesis asd hi asd: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (TIGR01296) 99% 442.8 USG-1 protein 38% 210.7

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

New query