GapMind for Amino acid biosynthesis

 

Protein WP_011305945.1 in Methanosarcina barkeri Fusaro

Annotation: NCBI__GCF_000195895.1:WP_011305945.1

Length: 280 amino acids

Source: GCF_000195895.1 in NCBI

Candidate for 2 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
chorismate biosynthesis aroE hi Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 (characterized) 48% 97% 239.6
chorismate biosynthesis aroE hi aroE: shikimate dehydrogenase (EC 1.1.1.25) (TIGR00507) 99% 272
chorismate biosynthesis aroD lo shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) (characterized) 37% 51% 166

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000195895.1

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