GapMind for Amino acid biosynthesis

 

Protein WP_011308059.1 in Methanosarcina barkeri Fusaro

Annotation: NCBI__GCF_000195895.1:WP_011308059.1

Length: 370 amino acids

Source: GCF_000195895.1 in NCBI

Candidate for 10 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-phenylalanine biosynthesis PPYAT hi Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 (characterized) 41% 98% 290.8 Type I methyltransferase recognizing GAAYNNNNNGTC with methylation at 3(6mA),-2(6mA) 42% 265.8
L-tyrosine biosynthesis tyrB hi Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 (characterized) 41% 98% 290.8 Type I methyltransferase recognizing GAAYNNNNNGTC with methylation at 3(6mA),-2(6mA) 42% 265.8
L-phenylalanine biosynthesis ptransferase hi aspartate-prephenate aminotransferase (EC 2.6.1.78) (characterized) 43% 92% 282 Type I methyltransferase recognizing GAAYNNNNNGTC with methylation at 3(6mA),-2(6mA) 42% 265.8
L-tyrosine biosynthesis ptransferase hi aspartate-prephenate aminotransferase (EC 2.6.1.78) (characterized) 43% 92% 282 Type I methyltransferase recognizing GAAYNNNNNGTC with methylation at 3(6mA),-2(6mA) 42% 265.8
L-lysine biosynthesis dapX lo Probable N-acetyl-LL-diaminopimelate aminotransferase; Putative aminotransferase A; EC 2.6.1.- (characterized) 39% 93% 260.8 Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 41% 290.8
L-lysine biosynthesis lysN lo Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 (characterized) 37% 96% 253.4 Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 41% 290.8
glycine biosynthesis agx1 lo alanine—glyoxylate transaminase (EC 2.6.1.44) (characterized) 37% 100% 245.7 Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 41% 290.8
L-valine biosynthesis ilvE lo Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 (characterized) 34% 90% 196.1 aspartate-prephenate aminotransferase (EC 2.6.1.78) 43% 282.0
L-lysine biosynthesis DAPtransferase lo LL-diaminopimelate aminotransferase (EC 2.6.1.83) (characterized) 31% 93% 166 Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 41% 290.8
L-histidine biosynthesis hisC lo histidinol-phosphate aminotransferase [EC:2.6.1.9] (characterized) 30% 73% 87.8 Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 41% 290.8

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000195895.1

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