Align anthranilate phosphoribosyltransferase (EC 2.4.2.18) (characterized)
to candidate Echvi_2507 Echvi_2507 anthranilate phosphoribosyltransferase
Query= reanno::Pedo557:CA265_RS05010
(329 letters)
>FitnessBrowser__Cola:Echvi_2507
Length = 338
Score = 410 bits (1055), Expect = e-119
Identities = 201/327 (61%), Positives = 257/327 (78%)
Query: 1 MKKILNHLFENKSFSREEAKNILISISEGAFNSSQIAAFITAYAMRNITVQELQGFRDAM 60
MK ILNHL E+++ +EEAK+ L I+ GA+N SQ+AAF+T Y MR+ITV+EL+GFR+AM
Sbjct: 1 MKDILNHLIEHRTLGKEEAKSTLKKITSGAYNQSQMAAFMTVYMMRSITVEELEGFREAM 60
Query: 61 LDMCVKVNLSGYDLIDLCGTGGDGKDTFNISTLSSFVVAGAGHHVAKHGNYGVSSGCGSS 120
L+ C+ V + YD +DLCGTGGDGKDTFNISTLSSFVVAGAG +VAKHGN GVSS CGSS
Sbjct: 61 LEQCIPVEIPEYDAMDLCGTGGDGKDTFNISTLSSFVVAGAGQNVAKHGNNGVSSICGSS 120
Query: 121 NVMEYLGYTFTNNEDTLKRNLDAAGICFLHAPLFNPAMKIVAPIRKELGVKTFFNMLGPM 180
N++ GY FTN+ + +++NLD AGICFLHAPLF+PAMK V PIRKELGVKTFFNMLGPM
Sbjct: 121 NLLAQFGYNFTNDINVIRKNLDEAGICFLHAPLFHPAMKNVGPIRKELGVKTFFNMLGPM 180
Query: 181 VNPGQPKYQMVGVFSLELARLYAYLYQDTDKSYTIVHALEGYDEVSLTCDVKTFSNKGEQ 240
VNP PK Q+VGVFSLELARLY YLYQ++ ++I+H+L+GYDEVSLT D K SN GE+
Sbjct: 181 VNPSFPKKQLVGVFSLELARLYGYLYQNSRVDFSILHSLDGYDEVSLTGDFKMISNSGER 240
Query: 241 ILTLQDMGFDKVEVNAIKGGDTVESSAKIFMDVLNGKATDVQNNVVLCNSALAIKTIKPQ 300
+++ + +G +++ +I+GG T+E+SAKIF D+L G+ T+ Q VVL NSA A+ T
Sbjct: 241 LISPESIGLPRLDAKSIEGGKTIEASAKIFQDILKGEGTEAQRAVVLANSAAALVTADQS 300
Query: 301 QSFADCFYEAEESLMSKKALNSFKQLL 327
SF + +A ESL S KAL +FK+L+
Sbjct: 301 LSFEEGIVKAAESLDSGKALQTFKKLV 327
Lambda K H
0.319 0.134 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 355
Number of extensions: 6
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 338
Length adjustment: 28
Effective length of query: 301
Effective length of database: 310
Effective search space: 93310
Effective search space used: 93310
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)
Align candidate Echvi_2507 Echvi_2507 (anthranilate phosphoribosyltransferase)
to HMM TIGR01245 (trpD: anthranilate phosphoribosyltransferase (EC 2.4.2.18))
../bin/blast/fastacmd -i /tmp/list.31960.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.31960.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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