Align N-acetylglutamylphosphate reductase (EC 1.2.1.38) (characterized)
to candidate N515DRAFT_3769 N515DRAFT_3769 N-acetyl-gamma-glutamyl-phosphate reductase
Query= reanno::Dyella79:N515DRAFT_3769
(319 letters)
>FitnessBrowser__Dyella79:N515DRAFT_3769
Length = 319
Score = 640 bits (1650), Expect = 0.0
Identities = 319/319 (100%), Positives = 319/319 (100%)
Query: 1 MSIDKKTIGIVGARGHTGAELIRLIATHPALELGFVSSRELDGQRVAEHVDGYAGELRYA 60
MSIDKKTIGIVGARGHTGAELIRLIATHPALELGFVSSRELDGQRVAEHVDGYAGELRYA
Sbjct: 1 MSIDKKTIGIVGARGHTGAELIRLIATHPALELGFVSSRELDGQRVAEHVDGYAGELRYA 60
Query: 61 NLDPAAVAAQGADVVVLALPNGKAAPYVEAIDAAKPETLILDLSADYRFNERWYYGLPEL 120
NLDPAAVAAQGADVVVLALPNGKAAPYVEAIDAAKPETLILDLSADYRFNERWYYGLPEL
Sbjct: 61 NLDPAAVAAQGADVVVLALPNGKAAPYVEAIDAAKPETLILDLSADYRFNERWYYGLPEL 120
Query: 121 TRGKWRGERRISNPGCYATAIQLSIAPLKDVLAAPPVSFGVSGYSGAGTTPSDKNNPEKL 180
TRGKWRGERRISNPGCYATAIQLSIAPLKDVLAAPPVSFGVSGYSGAGTTPSDKNNPEKL
Sbjct: 121 TRGKWRGERRISNPGCYATAIQLSIAPLKDVLAAPPVSFGVSGYSGAGTTPSDKNNPEKL 180
Query: 181 RDNLMPYSLTGHTHEQEASRHLGLPVEFMPHVAPHFRGLTVTTNLYLVRPMKREEILQRF 240
RDNLMPYSLTGHTHEQEASRHLGLPVEFMPHVAPHFRGLTVTTNLYLVRPMKREEILQRF
Sbjct: 181 RDNLMPYSLTGHTHEQEASRHLGLPVEFMPHVAPHFRGLTVTTNLYLVRPMKREEILQRF 240
Query: 241 RHAYDGEKLVKVVDEAPWVSQIAHRHHAEVGGFAVSVDGKRVVIVATLDNLLKGAATQAI 300
RHAYDGEKLVKVVDEAPWVSQIAHRHHAEVGGFAVSVDGKRVVIVATLDNLLKGAATQAI
Sbjct: 241 RHAYDGEKLVKVVDEAPWVSQIAHRHHAEVGGFAVSVDGKRVVIVATLDNLLKGAATQAI 300
Query: 301 QNINRAIGVDEYTSIPLEG 319
QNINRAIGVDEYTSIPLEG
Sbjct: 301 QNINRAIGVDEYTSIPLEG 319
Lambda K H
0.318 0.136 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 505
Number of extensions: 8
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 319
Length adjustment: 28
Effective length of query: 291
Effective length of database: 291
Effective search space: 84681
Effective search space used: 84681
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.1 bits)
Align candidate N515DRAFT_3769 N515DRAFT_3769 (N-acetyl-gamma-glutamyl-phosphate reductase)
to HMM TIGR01850 (argC: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38))
../bin/blast/fastacmd -i /tmp/list.3642.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.3642.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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