Align Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 (characterized)
to candidate N515DRAFT_4267 N515DRAFT_4267 asparagine synthase (glutamine-hydrolysing)
Query= SwissProt::P64248
(652 letters)
>FitnessBrowser__Dyella79:N515DRAFT_4267
Length = 655
Score = 291 bits (745), Expect = 6e-83
Identities = 227/663 (34%), Positives = 318/663 (47%), Gaps = 50/663 (7%)
Query: 1 MCGLLAFVAAPAGAAGPEGADAASAIARASHLMRHRGPDESGTWHAVDGASGGVVFGFNR 60
MCG+ A + PAGA P A+A + L+ HRGPD+ G W D ASG + R
Sbjct: 1 MCGI-AGLWIPAGA--PRERLERQALAMTTRLL-HRGPDDGGVWS--DEASG-IALAQRR 53
Query: 61 LSIIDIAHS-HQPLRWGPPEAPDRYVLVFNGEIYNYLELRDELRTQHGA-VFATDGDGEA 118
L+IID++ + HQP+ A RY VFNGEIYN+L+LR L + A ++ D E
Sbjct: 54 LAIIDLSPAGHQPMH----SACGRYAAVFNGEIYNHLDLRARLAAEGQAPMWRGHSDTET 109
Query: 119 ILAGYHHWGTE-VLQRLRGMFAFALWDTVTRELFCARDPFGIKPLFIATGAGGTAVASEK 177
++A WG E LQ GMFA ALWD R L ARD G KPL+ SE
Sbjct: 110 LVACIAAWGLEPALQACIGMFALALWDRRERSLALARDRLGEKPLYYGWQGDALLFGSEL 169
Query: 178 KCLLDLVELVGFDTEIDHRALQHYTVLQYVPEPETLHRGVRRLESGCFARIRA----DQL 233
K L GF ++D AL VP P +++RG+ +L G R++A D
Sbjct: 170 KALK---AYEGFRPDVDRDALTLLLRHNCVPAPYSIYRGIAKLRPGHVLRLQAGGPRDAE 226
Query: 234 APVITRY--FVPRFAASPITNDNDQARYDEITAVLEDSVAKHMRADVTVGAFLSGGIDST 291
RY V A P +D+ D + + SV M ADV +GAFLSGGIDS+
Sbjct: 227 PQPYWRYNDVVAAGLAEPFFG-SDRDAIDALETQIAQSVRAQMLADVPLGAFLSGGIDSS 285
Query: 292 AIAALAIRHNPRLI-TFTTGFEREGFSEIDVAVASAEAIGARHIAKVVSADEFVAALPEI 350
I AL + + R + TFT GF +G+ E A A A +G H V ++ +A +P++
Sbjct: 286 TIVALMQKQSGRPVKTFTIGFGEDGYDEATHAKAVAAHLGTEHTELYVRPEDALAVIPKL 345
Query: 351 VWYLDEPVADPALVPLFFVAREARKHVKVVLSGEGADELFGGYTIYREPLSL-RPFDYLP 409
EP AD + +P + V++ AR+HV V LSG+ DELFGGY Y + LP
Sbjct: 346 PSMYCEPFADSSQIPTYLVSQLARRHVTVALSGDAGDELFGGYNRYLAARRVWERMQRLP 405
Query: 410 KPLRRSMGKVSKPLPEGMRGKSLLHRGSLTLEERYYGNARSFSGAQLREVLP-------- 461
+R + + +P + R + L +R + +L VL
Sbjct: 406 SFVRHAAAGALRAVPPATWDR-WYERARVLLPKRMHVATPGDKAQKLAGVLALSSGEQFF 464
Query: 462 -GFRPDWTHTDVTAPVYAESA-------GWDPVARMQH----IDLFTWLRGDILVKADKI 509
W+ + AE + W +H +D ++ DILVK D+
Sbjct: 465 HQLTSQWSDPENLVQGAAEPSTLLTDPQAWPQTDSFEHWMMAMDAQAYMADDILVKVDRA 524
Query: 510 TMANSLELRVPFLDPEVFAVASRLPAGAKITRTTTKYALRRALEPIVPAHVLHRPKLGFP 569
MANSLE RVP LDP V A+A R+P KI K+ LR+ L VP ++ RPK GF
Sbjct: 525 AMANSLETRVPLLDPRVVALAWRMPLHLKIRDGQGKWLLRQVLYRHVPKELIERPKQGFG 584
Query: 570 VPIRHWLRAGELLEWAYATV--GSSQAGHLVDIAAVYRMLDEHRCGSSDHSRRLWTMLIF 627
VP+ WLR G L +WA + + G + + A + R+ +EH G + +LW +L+F
Sbjct: 585 VPLDSWLR-GPLRDWAESLLDEGRLRREGYLRHAPIRRVWNEHLSGKRNWQHQLWNVLMF 643
Query: 628 MLW 630
W
Sbjct: 644 QAW 646
Lambda K H
0.323 0.138 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1142
Number of extensions: 63
Number of successful extensions: 8
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 652
Length of database: 655
Length adjustment: 38
Effective length of query: 614
Effective length of database: 617
Effective search space: 378838
Effective search space used: 378838
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 54 (25.4 bits)
Align candidate N515DRAFT_4267 N515DRAFT_4267 (asparagine synthase (glutamine-hydrolysing))
to HMM TIGR01536 (asnB: asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4))
../bin/blast/fastacmd -i /tmp/list.6854.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.6854.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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