Align Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 (characterized)
to candidate N515DRAFT_0567 N515DRAFT_0567 acetolactate synthase, large subunit
Query= SwissProt::P0DP90 (548 letters) >FitnessBrowser__Dyella79:N515DRAFT_0567 Length = 625 Score = 424 bits (1091), Expect = e-123 Identities = 240/580 (41%), Positives = 336/580 (57%), Gaps = 37/580 (6%) Query: 1 MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHL-----------LCRHEQG 49 M+GA+ VV L +GV+ +FGY GGAI+PVYDA++ H+ + +EQG Sbjct: 26 MSGAEVVVQVLADEGVDVLFGYSGGAILPVYDAVFRYNATHIGPSGGEPMPLIVPANEQG 85 Query: 50 AAMAAIGYARATGKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAPFIGTDAF 109 A A GYARA+GK GV I TSGPGATN++T + D++ DS+P+V + GQV IG+DAF Sbjct: 86 AGFMAAGYARASGKVGVAIVTSGPGATNMVTPVRDSMSDSVPMVVLCGQVPTTAIGSDAF 145 Query: 110 QEVDVLGLSLACTKHSFLVQSLEELPRIMAEAFDVACSGRPGPVLVDIPKDIQ------- 162 QE + + AC KH FLV E+L + AF++A SGRPGPV+VDIPKD+Q Sbjct: 146 QEAPIANIMSACAKHVFLVTDAEKLEATLRTAFEIARSGRPGPVVVDIPKDVQNTLLPFH 205 Query: 163 ----LASGDLEPWFTTVENEVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALRE 218 L +E T A+ + LA++++P++Y GGG + A LR Sbjct: 206 GEGLLPMPGYRARLQRLEQS-TLDDAQCVAFFEALAQSKRPLIYAGGGTIASGASHELRA 264 Query: 219 FLAATKMPATCTLKGLGAVEADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDRVT 278 F+A +P T TL GLGA + P L MLGMHGT AN+AV++CD L +GARFDDRV Sbjct: 265 FVADYGLPVTTTLMGLGAYDTTEPLALHMLGMHGTAYANYAVEDCDFLFTLGARFDDRVA 324 Query: 279 GKLNTFAPHASVI-HMDIDPAEMNKLRQAHVALQGDLNALLPAL-----------QQPLN 326 G + FAP A I +DIDPAE+ K++ GDL L L Q Sbjct: 325 GVPDKFAPQAKFIAQIDIDPAEIGKVKSVDWHHTGDLTRTLAQLRAWGERHGWREQLSAR 384 Query: 327 QYDWQQHCAQLRDEHSWRYDHPGDAIYAPLLLKQLSDRKPADCVVTTDVGQHQMWAAQHI 386 W +H A+L+ H+ YD I ++++++ V++T VGQHQMWAAQ+ Sbjct: 385 YAPWHRHVAELKQVHALDYDRASPLIQPYAVIEEINRHTQGHAVISTGVGQHQMWAAQYF 444 Query: 387 AHTRPENFITSSGLGTMGFGLPAAVGAQVARPNDTVVCISGDGSFMMNVQELGTVKRKQL 446 P ++++S +GTMGFGLPAA+GAQ ARP V+ I GD S MN+ EL TV L Sbjct: 445 DFREPRHWLSSGSMGTMGFGLPAAIGAQFARPGAVVIDIDGDASIRMNLGELETVTTYGL 504 Query: 447 PLKIVLLDNQRLGMVRQWQQLFFQERYSETTLT-DNPDFLMLASAFGIH-GQHITRKDQV 504 P+K+V+L+N GMVRQWQ+LFF+ R++ + + DF+ A A G + + R++++ Sbjct: 505 PVKVVVLNNIGDGMVRQWQKLFFRGRFASSDKSLHRKDFIKAAQADGFEWARRLERREEL 564 Query: 505 EAALDTMLNSDGPYLLHVSIDELENVWPLVPPGASNSEML 544 A + L GP L V ID V+P+V PGA+ ++M+ Sbjct: 565 AATIADFLAHPGPAFLEVMIDPDAGVYPMVGPGATYAQMI 604 Lambda K H 0.320 0.135 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 949 Number of extensions: 38 Number of successful extensions: 6 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 548 Length of database: 625 Length adjustment: 37 Effective length of query: 511 Effective length of database: 588 Effective search space: 300468 Effective search space used: 300468 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 53 (25.0 bits)
Align candidate N515DRAFT_0567 N515DRAFT_0567 (acetolactate synthase, large subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.20088.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.20088.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.