Align threonine synthase (EC 4.2.3.1) (characterized)
to candidate N515DRAFT_0575 N515DRAFT_0575 threonine synthase
Query= reanno::Dyella79:N515DRAFT_0575
(441 letters)
>FitnessBrowser__Dyella79:N515DRAFT_0575
Length = 441
Score = 892 bits (2306), Expect = 0.0
Identities = 441/441 (100%), Positives = 441/441 (100%)
Query: 1 MSEPLLYHSTRGAAHGAGIGEAIAAGLAPDGGLYVPEALPSRRPDDFDPDGTLADTAARL 60
MSEPLLYHSTRGAAHGAGIGEAIAAGLAPDGGLYVPEALPSRRPDDFDPDGTLADTAARL
Sbjct: 1 MSEPLLYHSTRGAAHGAGIGEAIAAGLAPDGGLYVPEALPSRRPDDFDPDGTLADTAARL 60
Query: 61 LRPFFAGHALAAELPAICAEAFCFDAPLRPLPQHPGAAMLELFHGPSAAFKDFGARFLAS 120
LRPFFAGHALAAELPAICAEAFCFDAPLRPLPQHPGAAMLELFHGPSAAFKDFGARFLAS
Sbjct: 61 LRPFFAGHALAAELPAICAEAFCFDAPLRPLPQHPGAAMLELFHGPSAAFKDFGARFLAS 120
Query: 121 CFRRLRKAGEAPLTILVATSGDTGAAVAAAFHRQPGVEVVILYPDGLVSPRQAHQLGCFG 180
CFRRLRKAGEAPLTILVATSGDTGAAVAAAFHRQPGVEVVILYPDGLVSPRQAHQLGCFG
Sbjct: 121 CFRRLRKAGEAPLTILVATSGDTGAAVAAAFHRQPGVEVVILYPDGLVSPRQAHQLGCFG 180
Query: 181 DNVRALRVAGRFDDCQRMVKAALNDTALQAQRPLSSANSISLGRLLPQMAYYAHASLRWW 240
DNVRALRVAGRFDDCQRMVKAALNDTALQAQRPLSSANSISLGRLLPQMAYYAHASLRWW
Sbjct: 181 DNVRALRVAGRFDDCQRMVKAALNDTALQAQRPLSSANSISLGRLLPQMAYYAHASLRWW 240
Query: 241 REHRRPLNFIVPTGNLGNALAAVWVREMGLPVGAIELACNANETLPDYFAGTPYAPRAAV 300
REHRRPLNFIVPTGNLGNALAAVWVREMGLPVGAIELACNANETLPDYFAGTPYAPRAAV
Sbjct: 241 REHRRPLNFIVPTGNLGNALAAVWVREMGLPVGAIELACNANETLPDYFAGTPYAPRAAV 300
Query: 301 ATLANAMDVGAPSNFERLRWTFPYDDDLRGQLSSHSVDDDTIRATVRRHALEHGEVFCPH 360
ATLANAMDVGAPSNFERLRWTFPYDDDLRGQLSSHSVDDDTIRATVRRHALEHGEVFCPH
Sbjct: 301 ATLANAMDVGAPSNFERLRWTFPYDDDLRGQLSSHSVDDDTIRATVRRHALEHGEVFCPH 360
Query: 361 TATAMHRLDLRQEKADWAVVSTAHAAKFESVVEPLIGRGVAVPPALQAMLARPAQAEAIE 420
TATAMHRLDLRQEKADWAVVSTAHAAKFESVVEPLIGRGVAVPPALQAMLARPAQAEAIE
Sbjct: 361 TATAMHRLDLRQEKADWAVVSTAHAAKFESVVEPLIGRGVAVPPALQAMLARPAQAEAIE 420
Query: 421 ASDDALKQWLLPQPAHVRRLG 441
ASDDALKQWLLPQPAHVRRLG
Sbjct: 421 ASDDALKQWLLPQPAHVRRLG 441
Lambda K H
0.322 0.136 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 937
Number of extensions: 23
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 441
Length adjustment: 32
Effective length of query: 409
Effective length of database: 409
Effective search space: 167281
Effective search space used: 167281
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)
Align candidate N515DRAFT_0575 N515DRAFT_0575 (threonine synthase)
to HMM TIGR00260 (thrC: threonine synthase (EC 4.2.3.1))
../bin/blast/fastacmd -i /tmp/list.8458.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.8458.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.