Align Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 (characterized)
to candidate N515DRAFT_0567 N515DRAFT_0567 acetolactate synthase, large subunit
Query= SwissProt::P0DP90
(548 letters)
>FitnessBrowser__Dyella79:N515DRAFT_0567
Length = 625
Score = 424 bits (1091), Expect = e-123
Identities = 240/580 (41%), Positives = 336/580 (57%), Gaps = 37/580 (6%)
Query: 1 MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHL-----------LCRHEQG 49
M+GA+ VV L +GV+ +FGY GGAI+PVYDA++ H+ + +EQG
Sbjct: 26 MSGAEVVVQVLADEGVDVLFGYSGGAILPVYDAVFRYNATHIGPSGGEPMPLIVPANEQG 85
Query: 50 AAMAAIGYARATGKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAPFIGTDAF 109
A A GYARA+GK GV I TSGPGATN++T + D++ DS+P+V + GQV IG+DAF
Sbjct: 86 AGFMAAGYARASGKVGVAIVTSGPGATNMVTPVRDSMSDSVPMVVLCGQVPTTAIGSDAF 145
Query: 110 QEVDVLGLSLACTKHSFLVQSLEELPRIMAEAFDVACSGRPGPVLVDIPKDIQ------- 162
QE + + AC KH FLV E+L + AF++A SGRPGPV+VDIPKD+Q
Sbjct: 146 QEAPIANIMSACAKHVFLVTDAEKLEATLRTAFEIARSGRPGPVVVDIPKDVQNTLLPFH 205
Query: 163 ----LASGDLEPWFTTVENEVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALRE 218
L +E T A+ + LA++++P++Y GGG + A LR
Sbjct: 206 GEGLLPMPGYRARLQRLEQS-TLDDAQCVAFFEALAQSKRPLIYAGGGTIASGASHELRA 264
Query: 219 FLAATKMPATCTLKGLGAVEADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDRVT 278
F+A +P T TL GLGA + P L MLGMHGT AN+AV++CD L +GARFDDRV
Sbjct: 265 FVADYGLPVTTTLMGLGAYDTTEPLALHMLGMHGTAYANYAVEDCDFLFTLGARFDDRVA 324
Query: 279 GKLNTFAPHASVI-HMDIDPAEMNKLRQAHVALQGDLNALLPAL-----------QQPLN 326
G + FAP A I +DIDPAE+ K++ GDL L L Q
Sbjct: 325 GVPDKFAPQAKFIAQIDIDPAEIGKVKSVDWHHTGDLTRTLAQLRAWGERHGWREQLSAR 384
Query: 327 QYDWQQHCAQLRDEHSWRYDHPGDAIYAPLLLKQLSDRKPADCVVTTDVGQHQMWAAQHI 386
W +H A+L+ H+ YD I ++++++ V++T VGQHQMWAAQ+
Sbjct: 385 YAPWHRHVAELKQVHALDYDRASPLIQPYAVIEEINRHTQGHAVISTGVGQHQMWAAQYF 444
Query: 387 AHTRPENFITSSGLGTMGFGLPAAVGAQVARPNDTVVCISGDGSFMMNVQELGTVKRKQL 446
P ++++S +GTMGFGLPAA+GAQ ARP V+ I GD S MN+ EL TV L
Sbjct: 445 DFREPRHWLSSGSMGTMGFGLPAAIGAQFARPGAVVIDIDGDASIRMNLGELETVTTYGL 504
Query: 447 PLKIVLLDNQRLGMVRQWQQLFFQERYSETTLT-DNPDFLMLASAFGIH-GQHITRKDQV 504
P+K+V+L+N GMVRQWQ+LFF+ R++ + + DF+ A A G + + R++++
Sbjct: 505 PVKVVVLNNIGDGMVRQWQKLFFRGRFASSDKSLHRKDFIKAAQADGFEWARRLERREEL 564
Query: 505 EAALDTMLNSDGPYLLHVSIDELENVWPLVPPGASNSEML 544
A + L GP L V ID V+P+V PGA+ ++M+
Sbjct: 565 AATIADFLAHPGPAFLEVMIDPDAGVYPMVGPGATYAQMI 604
Lambda K H
0.320 0.135 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 949
Number of extensions: 38
Number of successful extensions: 6
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 625
Length adjustment: 37
Effective length of query: 511
Effective length of database: 588
Effective search space: 300468
Effective search space used: 300468
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)
Align candidate N515DRAFT_0567 N515DRAFT_0567 (acetolactate synthase, large subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.22405.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.22405.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.