Align histidinol-phosphate aminotransferase (EC 2.6.1.9) (characterized)
to candidate 8500145 DvMF_0908 histidinol-phosphate aminotransferase (RefSeq)
Query= reanno::Miya:8500145
(387 letters)
>FitnessBrowser__Miya:8500145
Length = 387
Score = 770 bits (1987), Expect = 0.0
Identities = 387/387 (100%), Positives = 387/387 (100%)
Query: 1 MCADKTASAGAPTGLPLASPSAVRPEVCGFKPYTPGLSIDEIRDRYGLAHVIKLASNENP 60
MCADKTASAGAPTGLPLASPSAVRPEVCGFKPYTPGLSIDEIRDRYGLAHVIKLASNENP
Sbjct: 1 MCADKTASAGAPTGLPLASPSAVRPEVCGFKPYTPGLSIDEIRDRYGLAHVIKLASNENP 60
Query: 61 LGTSPVVQHALRHKADLAFRYAQSGNPRLTAAIAAHHGVPAERVVAGNGSDEIIDLIVRV 120
LGTSPVVQHALRHKADLAFRYAQSGNPRLTAAIAAHHGVPAERVVAGNGSDEIIDLIVRV
Sbjct: 61 LGTSPVVQHALRHKADLAFRYAQSGNPRLTAAIAAHHGVPAERVVAGNGSDEIIDLIVRV 120
Query: 121 RAVPGVHNVVAFNPCFSIYELQTRLAGVEFRQAPLAADFSFDWDGLMALVDDATAVVFVT 180
RAVPGVHNVVAFNPCFSIYELQTRLAGVEFRQAPLAADFSFDWDGLMALVDDATAVVFVT
Sbjct: 121 RAVPGVHNVVAFNPCFSIYELQTRLAGVEFRQAPLAADFSFDWDGLMALVDDATAVVFVT 180
Query: 181 TPDNPSGFCPPVADLERLAHALPAGCLLVVDEAYMDFCGDESAHSLLARVDEFPNLAVLR 240
TPDNPSGFCPPVADLERLAHALPAGCLLVVDEAYMDFCGDESAHSLLARVDEFPNLAVLR
Sbjct: 181 TPDNPSGFCPPVADLERLAHALPAGCLLVVDEAYMDFCGDESAHSLLARVDEFPNLAVLR 240
Query: 241 TFSKSFGLAGLRLGYGILPVQLADYLRRVRLPFSVNILAEEAGLAALADDVFRTETLRVI 300
TFSKSFGLAGLRLGYGILPVQLADYLRRVRLPFSVNILAEEAGLAALADDVFRTETLRVI
Sbjct: 241 TFSKSFGLAGLRLGYGILPVQLADYLRRVRLPFSVNILAEEAGLAALADDVFRTETLRVI 300
Query: 301 SEGRAALTEGLTALGCHVYPSKANFVMFRPAPTCKSAAHLFEELLRRGIIIRPLKSYGLP 360
SEGRAALTEGLTALGCHVYPSKANFVMFRPAPTCKSAAHLFEELLRRGIIIRPLKSYGLP
Sbjct: 301 SEGRAALTEGLTALGCHVYPSKANFVMFRPAPTCKSAAHLFEELLRRGIIIRPLKSYGLP 360
Query: 361 DLLRVSVGSPDENAAFLKAAGEIMAHA 387
DLLRVSVGSPDENAAFLKAAGEIMAHA
Sbjct: 361 DLLRVSVGSPDENAAFLKAAGEIMAHA 387
Lambda K H
0.322 0.138 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 714
Number of extensions: 6
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 387
Length adjustment: 30
Effective length of query: 357
Effective length of database: 357
Effective search space: 127449
Effective search space used: 127449
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)
Align candidate 8500145 DvMF_0908 (histidinol-phosphate aminotransferase (RefSeq))
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))
../bin/blast/fastacmd -i /tmp/list.30593.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.30593.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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