Align ATP phosphoribosyltransferase (EC 2.4.2.17) (characterized)
to candidate 8501229 DvMF_1963 ATP phosphoribosyltransferase (RefSeq)
Query= reanno::Miya:8501229
(293 letters)
>FitnessBrowser__Miya:8501229
Length = 293
Score = 581 bits (1497), Expect = e-171
Identities = 293/293 (100%), Positives = 293/293 (100%)
Query: 1 MSGNNMLKIGIPKGSLEEATVNLFARSGWKIRKHHRNYFPEINDPELTARLCRVQEIPRY 60
MSGNNMLKIGIPKGSLEEATVNLFARSGWKIRKHHRNYFPEINDPELTARLCRVQEIPRY
Sbjct: 1 MSGNNMLKIGIPKGSLEEATVNLFARSGWKIRKHHRNYFPEINDPELTARLCRVQEIPRY 60
Query: 61 LEDGVLDVGLTGKDWLLETGADVVTVSDLVYSKVSNRPARWVLAVAGDSPYVRPEDLAGC 120
LEDGVLDVGLTGKDWLLETGADVVTVSDLVYSKVSNRPARWVLAVAGDSPYVRPEDLAGC
Sbjct: 61 LEDGVLDVGLTGKDWLLETGADVVTVSDLVYSKVSNRPARWVLAVAGDSPYVRPEDLAGC 120
Query: 121 TIATELLGVTRRYFEDAGIPVKVQYSWGATEAKVVEGLADAIVEVTETGTTIKAHGLRII 180
TIATELLGVTRRYFEDAGIPVKVQYSWGATEAKVVEGLADAIVEVTETGTTIKAHGLRII
Sbjct: 121 TIATELLGVTRRYFEDAGIPVKVQYSWGATEAKVVEGLADAIVEVTETGTTIKAHGLRII 180
Query: 181 AEVLLTNTVLIAGKAAWADPWKRAKIEQIDLLLQGALRADSLVGLKMNVPAHNLDAVLDQ 240
AEVLLTNTVLIAGKAAWADPWKRAKIEQIDLLLQGALRADSLVGLKMNVPAHNLDAVLDQ
Sbjct: 181 AEVLLTNTVLIAGKAAWADPWKRAKIEQIDLLLQGALRADSLVGLKMNVPAHNLDAVLDQ 240
Query: 241 LPSLNSPTVAGLRDSTWYAVEIVVENDLVRDLIPRLRAAGAEGIIEYSLNKVI 293
LPSLNSPTVAGLRDSTWYAVEIVVENDLVRDLIPRLRAAGAEGIIEYSLNKVI
Sbjct: 241 LPSLNSPTVAGLRDSTWYAVEIVVENDLVRDLIPRLRAAGAEGIIEYSLNKVI 293
Lambda K H
0.318 0.136 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 501
Number of extensions: 25
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 293
Length adjustment: 26
Effective length of query: 267
Effective length of database: 267
Effective search space: 71289
Effective search space used: 71289
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.1 bits)
Align candidate 8501229 DvMF_1963 (ATP phosphoribosyltransferase (RefSeq))
to HMM TIGR00070 (hisG: ATP phosphoribosyltransferase (EC 2.4.2.17))
../bin/blast/fastacmd -i /tmp/list.15632.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.15632.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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