Align acetolactate synthase (subunit 1/2) (EC 2.2.1.6) (characterized)
to candidate 8499377 DvMF_0154 acetolactate synthase 3 regulatory subunit (RefSeq)
Query= BRENDA::P9WKJ3
(168 letters)
>FitnessBrowser__Miya:8499377
Length = 163
Score = 157 bits (396), Expect = 1e-43
Identities = 82/154 (53%), Positives = 112/154 (72%)
Query: 6 HTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATECKDRSRMTIVVSAEDTPLEQITK 65
H LSVLVE++PGVL+RVA LFS RGFNIESL V T + S MTI S E+ +EQI K
Sbjct: 3 HVLSVLVENEPGVLSRVAGLFSGRGFNIESLNVAPTLEEGVSLMTITTSGEEQIIEQIVK 62
Query: 66 QLNKLINVIKIVEQDDEHSVSRELALIKVQADAGSRSQVIEAVNLFRANVIDVSPESLTV 125
QL KL+ VIK+V+ D +V RE+ ++KVQAD R++V+ ++FR V+DVS LT+
Sbjct: 63 QLRKLVTVIKVVDFIDVSAVEREMVMVKVQADDARRAEVLRIADIFRCKVVDVSLNDLTL 122
Query: 126 EATGNRGKLEALLRVLEPFGIREIAQSGMVSLSR 159
EATG+ GK++A+L +L FGI+EIA++G V++ R
Sbjct: 123 EATGDHGKIQAILSLLARFGIKEIARTGTVAMRR 156
Lambda K H
0.315 0.131 0.347
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 95
Number of extensions: 3
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 163
Length adjustment: 18
Effective length of query: 150
Effective length of database: 145
Effective search space: 21750
Effective search space used: 21750
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 43 (21.2 bits)
Align candidate 8499377 DvMF_0154 (acetolactate synthase 3 regulatory subunit (RefSeq))
to HMM TIGR00119 (ilvN: acetolactate synthase, small subunit (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.17866.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.17866.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.