GapMind for Amino acid biosynthesis

 

Protein WP_013075073.1 in Kyrpidia tusciae DSM 2912

Annotation: NCBI__GCF_000092905.1:WP_013075073.1

Length: 394 amino acids

Source: GCF_000092905.1 in NCBI

Candidate for 5 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
glycine biosynthesis agx1 med Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase; SPT; EC 2.6.1.44; EC 2.6.1.51 (characterized) 41% 93% 276.9 (S)-ureidoglycine-glyoxylate transaminase (EC 2.6.1.112) 43% 320.9
L-cysteine biosynthesis serC lo phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) (characterized) 39% 96% 272.3 (S)-ureidoglycine-glyoxylate transaminase (EC 2.6.1.112) 43% 320.9
L-lysine biosynthesis dapC lo phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) (characterized) 39% 96% 272.3 (S)-ureidoglycine-glyoxylate transaminase (EC 2.6.1.112) 43% 320.9
L-serine biosynthesis serC lo phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) (characterized) 39% 96% 272.3 (S)-ureidoglycine-glyoxylate transaminase (EC 2.6.1.112) 43% 320.9
L-serine biosynthesis serB lo Phosphoserine aminotransferase; EC 2.6.1.52 (characterized, see rationale) 30% 92% 143.3 (S)-ureidoglycine-glyoxylate transaminase (EC 2.6.1.112) 43% 320.9

Sequence Analysis Tools

Software error:

Failed to contact NCBI datasets API at https://api.ncbi.nlm.nih.gov/datasets/v2alpha/genome/accession/GCF_000092905.1/dataset_report

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.