GapMind for Amino acid biosynthesis

 

Protein WP_037572372.1 in Phaeacidiphilus oryzae TH49

Annotation: NCBI__GCF_000744815.1:WP_037572372.1

Length: 451 amino acids

Source: GCF_000744815.1 in NCBI

Candidate for 4 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-arginine biosynthesis argD hi 4-aminobutyrate aminotransferase GabT; 5-aminovalerate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.48 (characterized) 45% 99% 362.5
L-proline biosynthesis argD hi 4-aminobutyrate aminotransferase GabT; 5-aminovalerate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.48 (characterized) 45% 99% 362.5
L-proline biosynthesis OAT lo Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 (characterized) 39% 99% 278.5 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) 59% 508.1
L-lysine biosynthesis lysN lo 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; L-2AA aminotransferase; EC 2.6.1.39 (characterized) 38% 98% 277.3 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) 59% 508.1

Sequence Analysis Tools

Software error:

Failed to contact NCBI datasets API at https://api.ncbi.nlm.nih.gov/datasets/v2alpha/genome/accession/GCF_000744815.1/dataset_report

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.