Alignments for a candidate for argH in Sulfuritalea hydrogenivorans DSM 22779

Align Argininosuccinate lyase; ASAL; ASL; Arginosuccinase; EC 4.3.2.1 (characterized)
to candidate WP_041100377.1 SUTH_RS14995 argininosuccinate lyase

Query= SwissProt::Q9LAE5
         (461 letters)



>NCBI__GCF_000828635.1:WP_041100377.1
          Length = 467

 Score =  444 bits (1141), Expect = e-129
 Identities = 231/453 (50%), Positives = 299/453 (66%), Gaps = 1/453 (0%)

Query: 7   WSQRFESALHPAIARFNASIGFDIELIEYDLTGSQAHAKMLAHTGIISSEEGEQLVAGLE 66
           WS RF   +   + R+ AS+ FD  +   D+  S AHA+MLA  GII++ +   +  G+ 
Sbjct: 16  WSGRFSEPVSDLVKRYTASVFFDRRMWRQDIRASLAHARMLARQGIIAATDLAAIEQGMA 75

Query: 67  QIRQEHRQGKFHPGVDAEDVHFAVEKRLTEIVGDVGKKLHTARSRNDQVGTDTRLYLRDQ 126
            I  E   G F+  +D EDVH  +EKRLT +VGD GK+LHT RSRNDQV TD RL+LRD 
Sbjct: 76  TITGEIEAGGFNWNLDDEDVHLNIEKRLTALVGDAGKRLHTGRSRNDQVATDIRLWLRDT 135

Query: 127 IQQIKSELREFQGVLLDIAEKHVETLIPGYTHLQRAQPVSLAHHLLAYFQMAQRDWERLG 186
           I  I   LR+FQ  LLD AE HV+T +PG+THLQ AQPV+  HHLLAYF+M +RD ER  
Sbjct: 136 IDDIDGLLRDFQKALLDTAEAHVDTPLPGFTHLQVAQPVTFGHHLLAYFEMLRRDRERFA 195

Query: 187 DVSRRVNISPLGCGALAGTTFPIDRHYTAKLLDFDNIYANSLDGVSDRDFAIEFLCAASL 246
           D  RRVN  PLG  ALAGTTFPIDR   A+ L F+++  NSLD VSDRDFAIEF  AASL
Sbjct: 196 DCRRRVNRLPLGAAALAGTTFPIDREAVARELGFESVCENSLDAVSDRDFAIEFCAAASL 255

Query: 247 IMVHLSRLAEEVILWSSEEFRFVILKDSCATGSSIMPQKKNPDVPELVRGKTGRVFGHLQ 306
           +M H+SR +EE+ILW S    F+ L D   TGSSIMPQKKNPDVPEL RGKTGRVFGHL 
Sbjct: 256 VMTHISRFSEELILWMSPRVGFIDLADRFCTGSSIMPQKKNPDVPELARGKTGRVFGHLM 315

Query: 307 AMLVIMKGLPLAYNKDLQEDKEGLFDSVNTVKASLEAMTILLREGLEFRTQRLAQAVTED 366
            +L +MKG PLAYNKD QEDKE LFD+ +T+  +L     L+  G++ + + +A A+ + 
Sbjct: 316 GLLTLMKGQPLAYNKDNQEDKEPLFDTADTLSDTLRIFADLV-PGIKVKPEAMAAALRQG 374

Query: 367 FSNATDVADYLAARGVPFREAYNLVGKVVKTSIAAGKLLKDLELEEWQQLHPAFAADIYE 426
           ++ ATD+ADYL  +G+PFR+A+  V + V+   A G  L +L L+E +   P    D + 
Sbjct: 375 YATATDLADYLVKKGLPFRDAHEAVARAVRACEARGCDLPELTLDELRSFSPLVGEDAFA 434

Query: 427 AISPRQVVAARNSHGGTGFVQVSKALIAARAQI 459
            ++    +AAR+  GGT   QV  A+   R ++
Sbjct: 435 VLTVAGSLAARDHLGGTAPAQVRAAIARCRTRL 467


Lambda     K      H
   0.320    0.135    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 533
Number of extensions: 23
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 467
Length adjustment: 33
Effective length of query: 428
Effective length of database: 434
Effective search space:   185752
Effective search space used:   185752
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)

Align candidate WP_041100377.1 SUTH_RS14995 (argininosuccinate lyase)
to HMM TIGR00838 (argH: argininosuccinate lyase (EC 4.3.2.1))

Software error:

../bin/blast/fastacmd -i /tmp/list.27701.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.27701.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.