Alignments for a candidate for hisC in Sulfuritalea hydrogenivorans DSM 22779

Align Histidinol-phosphate aminotransferase; Imidazole acetol phosphate aminotransferase; IAP aminotransferase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 (characterized)
to candidate WP_041098942.1 SUTH_RS09875 histidinol-phosphate transaminase

Query= SwissProt::P34037
         (369 letters)



>NCBI__GCF_000828635.1:WP_041098942.1
          Length = 362

 Score =  226 bits (576), Expect = 7e-64
 Identities = 139/352 (39%), Positives = 201/352 (57%), Gaps = 15/352 (4%)

Query: 7   LRPKSWIDSIAPYIPGSSKTLDGRPA-------VKLSSNENPLGTSLKAKEAYREAIDSL 59
           L+  ++I +I+PYIPG   T   R         VKL+SNENPLG S KA++A   A+  +
Sbjct: 5   LQAPAYIRAISPYIPGKPITELARQMGIPVEKIVKLASNENPLGMSPKARKAVEAALAGV 64

Query: 60  SLYPDSGATALREAIGACYNLDPARIIHGTGSDEILHLAAGAYAGQDDEVLYPRYSFSVY 119
             YPD     L  A+   + +   +++ G GS+++L LAA  +       ++ R++F+VY
Sbjct: 65  ERYPDQ--FDLIAALAERHGVATGQVVLGNGSNDVLDLAARVFLAPGRSAVFSRHAFAVY 122

Query: 120 PLAARRVGATPVEAPDDDYRCSVDALLKAVTPRTRVVFIANPNNPTGTWITRAEVEKLHN 179
           PLA+   GA  + AP   Y     A+L A+ P TR+V+IANPNNPTG ++ +AE+    +
Sbjct: 123 PLASMAAGAECIVAPAKHYGHDPAAMLAAIRPDTRIVWIANPNNPTGNFLPQAELRAFID 182

Query: 180 GLPRNCLLVIDQAYAEYLDPECDDGALALAKNTKNVLVTRTFSKIYGLAAERIGWAYACP 239
            +P +  +V+D+AY EYL P      +A  K+  N++VTRTFSKIYGLA  RIG+A A  
Sbjct: 183 KIPADIAVVLDEAYTEYLAPADRADTVAWIKDLPNLIVTRTFSKIYGLAGLRIGYAVARA 242

Query: 240 EIIDALNRIRAPFNVTIAGQKAAVAALEDQAFIQNSFKHNKKWRGWFENQMALLSNAGIR 299
           ++ D LNR+R PFNV       A+AAL+D  F+  SF+ N++     E  +A L   G+ 
Sbjct: 243 DVADLLNRVRQPFNVNNLALAGALAALDDHGFVAESFELNRR---GMEQIVAGLKRLGLE 299

Query: 300 VIPSSANFTLLLFEGSLTAETAYKALMDHGYTTRWLPGQRLPHALRITIGSE 351
            IPS  NF  + FE    A    K L+  G   R + G  LP+ LR+TIG E
Sbjct: 300 HIPSHGNF--VTFEVKDGAAVNGK-LLQQGVIVRPIGGYGLPNHLRVTIGLE 348


Lambda     K      H
   0.318    0.133    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 365
Number of extensions: 20
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 362
Length adjustment: 30
Effective length of query: 339
Effective length of database: 332
Effective search space:   112548
Effective search space used:   112548
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)

Align candidate WP_041098942.1 SUTH_RS09875 (histidinol-phosphate transaminase)
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))

Software error:

../bin/blast/fastacmd -i /tmp/list.9833.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.9833.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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