Alignments for a candidate for hisC in Sulfuritalea hydrogenivorans DSM 22779

Align histidinol-phosphate aminotransferase (EC 2.6.1.9) (characterized)
to candidate WP_041100149.1 SUTH_RS14150 histidinol-phosphate transaminase

Query= reanno::Putida:PP_0967
         (348 letters)



>NCBI__GCF_000828635.1:WP_041100149.1
          Length = 353

 Score =  506 bits (1303), Expect = e-148
 Identities = 249/347 (71%), Positives = 281/347 (80%)

Query: 1   MSRFWSPFVKDLVPYVPGEQPKLARLVKLNTNENPYGPSPKALEAMRGELNDNLRLYPDP 60
           MSRFWS  VK L PYVPGEQPKLA LVKLNTNENPYGPSP+ALEA+R    ++L+LYPDP
Sbjct: 1   MSRFWSDVVKGLTPYVPGEQPKLANLVKLNTNENPYGPSPRALEAIRAATGESLKLYPDP 60

Query: 61  NGDRLKQAVAEYYGVTPAQVFVGNGSDEVLAHIFHGLFQHDAPLLFPDISYSFYPVYCGL 120
           N ++LK A+ +Y+G+    VFVGNGSDEVLAHIF GL +   P+LFPDISYSFYPVYCGL
Sbjct: 61  NAEQLKAAIGKYHGIGAQNVFVGNGSDEVLAHIFLGLLKQSRPILFPDISYSFYPVYCGL 120

Query: 121 YGIAFEQVALDEQFQIRIEDYKKPNAGIIFPNPNAPTGCLMPLQAVEELLQANRDSVVVV 180
           Y + FE + L   F IR+ DY KPN GIIFPNPNAPTGCL+PL  +E LLQ+N DSVVV+
Sbjct: 121 YQVDFETIPLANDFSIRLGDYAKPNGGIIFPNPNAPTGCLVPLVEIERLLQSNPDSVVVI 180

Query: 181 DEAYIDFGGETAISLVDRYDNLLVTQTLSKSRSLAGLRVGLAVGHPDLIEALERIKNSFN 240
           DEAY+DFGGE+AISL  RY NLLV QTLSKSRSLAGLRVG AVGH DLIEALER+KNSFN
Sbjct: 181 DEAYVDFGGESAISLTARYPNLLVVQTLSKSRSLAGLRVGFAVGHVDLIEALERVKNSFN 240

Query: 241 SYPLDRAAIVGAAVAFEDREYFEETCRKVIDSREVLVGQLQAKGFEVLPSAANFIFARHP 300
           SYPLDR AI GA  A EDREYF++TC+ VI +RE LVG L+A GFEVLPSAANFIFARHP
Sbjct: 241 SYPLDRLAIAGAVAAIEDREYFDKTCKAVIATREKLVGDLKALGFEVLPSAANFIFARHP 300

Query: 301 QQDAGELAARLREQGVIVRHFKQPRIAQFLRITIGTPEMNQALLDAL 347
           Q DA E A  LR + +IVRHFK PRI QFLRIT+GT E   AL+ AL
Sbjct: 301 QHDAQESALALRRRSIIVRHFKLPRIEQFLRITVGTDEQCDALVAAL 347


Lambda     K      H
   0.321    0.139    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 460
Number of extensions: 11
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 353
Length adjustment: 29
Effective length of query: 319
Effective length of database: 324
Effective search space:   103356
Effective search space used:   103356
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)

Align candidate WP_041100149.1 SUTH_RS14150 (histidinol-phosphate transaminase)
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))

Software error:

../bin/blast/fastacmd -i /tmp/list.17068.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.17068.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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