Align phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (characterized)
to candidate WP_041100139.1 SUTH_RS14120 phosphoribosyl-ATP diphosphatase
Query= reanno::BFirm:BPHYT_RS17670
(131 letters)
>NCBI__GCF_000828635.1:WP_041100139.1
Length = 109
Score = 98.6 bits (244), Expect = 2e-26
Identities = 50/105 (47%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Query: 17 DTLMRLAAIIDSRKGGDPDVSYVSRLFHKGDDAVLKKIGEEATEVVLAAKDARHGGAPKA 76
+ + R+ A + RKG PD SYV+ L+ KG DA+ KK+ EEA E ++AAKD G
Sbjct: 5 EVIHRVQATLLERKGAAPDSSYVASLYAKGTDAICKKVAEEAAETIMAAKD----GDRLH 60
Query: 77 LVGEVADLWFHCLVMLSHFDLSPADVLAELERREGMSGIEEKALR 121
LV EV DLWFH +++L+ F + DV+ E RREG+SGI+EK R
Sbjct: 61 LVREVTDLWFHSMILLTQFGIGVDDVMVEFRRREGISGIDEKNSR 105
Lambda K H
0.313 0.129 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 131
Length of database: 109
Length adjustment: 13
Effective length of query: 118
Effective length of database: 96
Effective search space: 11328
Effective search space used: 11328
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 41 (20.4 bits)
Align candidate WP_041100139.1 SUTH_RS14120 (phosphoribosyl-ATP diphosphatase)
to HMM TIGR03188 (hisE: phosphoribosyl-ATP diphosphatase (EC 3.6.1.31))
../bin/blast/fastacmd -i /tmp/list.24187.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.24187.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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