Align acetolactate synthase (subunit 1/2) (EC 2.2.1.6) (characterized)
to candidate WP_041099919.1 SUTH_RS13450 acetolactate synthase small subunit
Query= BRENDA::P00894
(163 letters)
>NCBI__GCF_000828635.1:WP_041099919.1
Length = 163
Score = 195 bits (496), Expect = 3e-55
Identities = 97/163 (59%), Positives = 132/163 (80%), Gaps = 1/163 (0%)
Query: 1 MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQI 60
MR I+S+L+ENE+GALSRV GLFS R +NIESLTVAPT+D +LSRMTI + G ++V+EQI
Sbjct: 1 MRHIISILIENEAGALSRVSGLFSARAFNIESLTVAPTEDASLSRMTIVSTGSDEVIEQI 60
Query: 61 EKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVKRNTEIFRGQIIDVTPSLY 120
KQL+KL+DV++V +L + AH+ERE+MLVK++A+G R+E+KR +IFRG+IIDVT S Y
Sbjct: 61 TKQLNKLIDVVKVVDLSEAAHIERELMLVKVRAAGKDREEMKRIADIFRGRIIDVTDSTY 120
Query: 121 TVQLAGTSGKLDAFLASIRDVAKIVEVARSGVVGLSRGDKIMR 163
++L G KLDAFL +I D A I+E R+GV G+ RGD+I++
Sbjct: 121 VIELTGNGSKLDAFLEAI-DRALILETVRTGVSGIGRGDRILK 162
Lambda K H
0.318 0.136 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 113
Number of extensions: 4
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 163
Length of database: 163
Length adjustment: 18
Effective length of query: 145
Effective length of database: 145
Effective search space: 21025
Effective search space used: 21025
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 43 (21.2 bits)
Align candidate WP_041099919.1 SUTH_RS13450 (acetolactate synthase small subunit)
to HMM TIGR00119 (ilvN: acetolactate synthase, small subunit (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.21635.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.21635.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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