Align acetohydroxyacid synthase subunit B (EC 2.2.1.6) (characterized)
to candidate WP_041099921.1 SUTH_RS13455 acetolactate synthase 3 catalytic subunit
Query= metacyc::MONOMER-18810
(585 letters)
>NCBI__GCF_000828635.1:WP_041099921.1
Length = 569
Score = 828 bits (2139), Expect = 0.0
Identities = 399/567 (70%), Positives = 479/567 (84%), Gaps = 1/567 (0%)
Query: 18 EMIGAEILVHALAEEGVEYVWGYPGGAVLYIYDELHKQTKFEHILVRHEQAAVHAADGYA 77
++ GAEI++ L EE VEYV+GYPGG+VL+IYDEL KQ KF+H+LVRHEQAAVHAAD Y+
Sbjct: 2 QLTGAEIVIRCLQEEKVEYVFGYPGGSVLFIYDELFKQDKFKHVLVRHEQAAVHAADAYS 61
Query: 78 RATGKVGVALVTSGPGVTNAVTGIATAYLDSIPMVVITGNVPTHAIGQDAFQECDTVGIT 137
R++ K+GV +VTSGPGVTNAVTGIATA++DS+PMV+I+G VPT IGQDAFQECDTVGIT
Sbjct: 62 RSSNKIGVCMVTSGPGVTNAVTGIATAHMDSVPMVIISGQVPTAYIGQDAFQECDTVGIT 121
Query: 138 RPIVKHNFLVKDVRDLAATIKKAFFIAATGRPGPVVVDIPKDVSRNACKYEYPKSIDMRS 197
RP VKHNFLVKDVRDLA T+KKAF+IA TGRPGPV+VDIPKD++ C+++YPK+I MRS
Sbjct: 122 RPCVKHNFLVKDVRDLAITLKKAFYIAKTGRPGPVLVDIPKDITNQKCEFDYPKTIAMRS 181
Query: 198 YNPVNKGHSGQIRKAVALLQGAERPYIYTGGGVVLANASDELRQLAALTGHPVTNTLMGL 257
YNPV KGHSGQI+KAV +L A+RP IY GGGV+L++A+++L +LA G+PVTNTLMGL
Sbjct: 182 YNPVVKGHSGQIKKAVQMLLEAKRPMIYAGGGVILSDAAEKLAKLARTLGYPVTNTLMGL 241
Query: 258 GAFPGTSKQFVGMLGMHGTYEANMAMQNCDVLIAIGARFDDRVIGNPAHFTSQARKIIHI 317
G +P T KQ +GMLGMHGTYEANMAMQNCDVLIA+GARFDDRVIGNP HF RKIIHI
Sbjct: 242 GGYPATDKQSLGMLGMHGTYEANMAMQNCDVLIAVGARFDDRVIGNPVHFAEIPRKIIHI 301
Query: 318 DIDPSSISKRVKVDIPIVGNVKDVLQELIAQIKASDIKPKREALAKWWEQIEQWRSVDCL 377
DIDPSSISKRVKVD+PIVGN+ DVL EL ++AS P +ALA WW+QI++WR L
Sbjct: 302 DIDPSSISKRVKVDVPIVGNLPDVLDELQKLLEASAGVPDSKALAVWWKQIDEWRGKKSL 361
Query: 378 KYDRSSEIIKPQYVVEKIWELTKGDAFICSDVGQHQMWAAQFYKFDEPRRWINSGGLGTM 437
KY + E+I PQYVVEK++E+T G+AFI SDVGQHQMWAAQ+YKFD+PRRWINSGGLGTM
Sbjct: 362 KYKQGKEVIMPQYVVEKLYEVTGGEAFITSDVGQHQMWAAQYYKFDKPRRWINSGGLGTM 421
Query: 438 GVGLPYAMGIKKAFPEKEVVTITGEGSIQMCIQELSTCLQYDTPVKICSLNNGYLGMVRQ 497
GVGLPYAMG++ A P+ V +TGE SIQM IQELST Q+ P+KI +LNN YLGMVRQ
Sbjct: 422 GVGLPYAMGVRFANPKATVACVTGEASIQMNIQELSTAKQFRLPIKIINLNNRYLGMVRQ 481
Query: 498 WQEIEYDNRYSHSYMDALPDFVKLAEAYGHVGMRVEKTSDVEPALREAF-RLKDRTVFLD 556
WQ++ + NRYS SY+DALPDFVKLAE+YGHVGM++E+ +DVEPALREAF + K+ VF+D
Sbjct: 482 WQQMFHGNRYSESYVDALPDFVKLAESYGHVGMKIERPADVEPALREAFTKHKNDLVFMD 541
Query: 557 FQTDPTENVWPMVQAGKGISEMLLGAE 583
F TD T NV+PMV AGKG+SEM+L E
Sbjct: 542 FLTDQTANVYPMVAAGKGLSEMILAEE 568
Lambda K H
0.319 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1012
Number of extensions: 28
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 569
Length adjustment: 36
Effective length of query: 549
Effective length of database: 533
Effective search space: 292617
Effective search space used: 292617
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)
Align candidate WP_041099921.1 SUTH_RS13455 (acetolactate synthase 3 catalytic subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.29277.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.29277.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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