Alignments for a candidate for serB in Sulfuritalea hydrogenivorans DSM 22779

Align Phosphoserine phosphatase ThrH; PSP; PSPase; EC 3.1.3.3 (characterized)
to candidate WP_041096573.1 SUTH_RS01615 bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH

Query= SwissProt::Q9I2Y2
         (205 letters)



>NCBI__GCF_000828635.1:WP_041096573.1
          Length = 202

 Score =  249 bits (635), Expect = 3e-71
 Identities = 123/201 (61%), Positives = 151/201 (75%)

Query: 1   MEIACLDLEGVLVPEIWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDI 60
           M++ CLDLEGVLVPEIWI F+++TGI  L  TTRD PDYD LMK RL +L +H L L DI
Sbjct: 1   MQLVCLDLEGVLVPEIWIEFSKRTGIPELSRTTRDEPDYDKLMKYRLDLLKKHKLGLPDI 60

Query: 61  QEVIATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD 120
           Q+VI+ + P+ GA +F+D LR  FQV+ILSDTFYEF+ PLM QL  P L CHKLE D + 
Sbjct: 61  QKVISDMGPMAGARDFLDALRRDFQVIILSDTFYEFAMPLMAQLNMPVLFCHKLEADAAG 120

Query: 121 RVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFP 180
            +V Y LR  + K++SV  FK L ++VIAAGDSYNDT ML+EAHAGILFH P+NVI EFP
Sbjct: 121 FLVNYHLRMPNQKKESVQRFKELRFKVIAAGDSYNDTAMLAEAHAGILFHPPQNVIDEFP 180

Query: 181 QFPAVHTYEDLKREFLKASSR 201
           QFP    Y +L+RE  KA++R
Sbjct: 181 QFPVTMNYTELRREIDKAAAR 201


Lambda     K      H
   0.323    0.140    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 153
Number of extensions: 4
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 205
Length of database: 202
Length adjustment: 21
Effective length of query: 184
Effective length of database: 181
Effective search space:    33304
Effective search space used:    33304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 45 (21.9 bits)

Align candidate WP_041096573.1 SUTH_RS01615 (bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH)
to HMM TIGR02137 (thrH: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein (EC 3.1.3.3))

Software error:

../bin/blast/fastacmd -i /tmp/list.14693.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.14693.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.