Alignments for a candidate for asp-kinase in Sulfuritalea hydrogenivorans DSM 22779

Align Aspartate kinase; Aspartokinase; EC 2.7.2.4 (characterized)
to candidate WP_041099485.1 SUTH_RS11835 aspartate kinase

Query= SwissProt::C3JXY0
         (413 letters)



>NCBI__GCF_000828635.1:WP_041099485.1
          Length = 413

 Score =  547 bits (1410), Expect = e-160
 Identities = 288/411 (70%), Positives = 340/411 (82%), Gaps = 7/411 (1%)

Query: 1   MALIVQKFGGTSVGSVERIEQVADKVKKFRDAGDDLVVVLSAMSGETNRLIDLAKAISGD 60
           MALIVQK+GGTS+GS ERI  VA +V +++  G  LVVV+SAMSGETNRLI LAK +S  
Sbjct: 1   MALIVQKYGGTSMGSPERIRNVAKRVARWKAQGHQLVVVVSAMSGETNRLIALAKDVS-- 58

Query: 61  QQPLPRELDVIVSTGEQVTIALLAMALNKRGVPAVSYTGSQVRILTDSAHTKARILQIDD 120
            QP  RELDV++STGEQVTIALLAMA+   G+ A SYTG QV++LTDS  TKARIL+IDD
Sbjct: 59  PQPDARELDVMISTGEQVTIALLAMAIRDLGLKARSYTGGQVKVLTDSTFTKARILEIDD 118

Query: 121 QKIRTDLKAGRVVVVAGFQGVDEQGNITTLGRGGSDTTGVALAAALKADECQIYTDVDGV 180
             +R DL    V++VAGFQGVD  GNITTLGRGGSDT+ VA+AAAL ADECQIYTDVDGV
Sbjct: 119 ANMRRDLDDDTVIIVAGFQGVDADGNITTLGRGGSDTSAVAMAAALAADECQIYTDVDGV 178

Query: 181 YTTDPRVVSVAQRLDKITFEEMLEMASLGSKVLQIRAVEFAGKYNVPLRVLHSF----KE 236
           YTTDPR+V  A++LD+ITFEEMLEMASLGSKVLQIR+VEFAGKY V LRVL SF    +E
Sbjct: 179 YTTDPRIVPEARKLDRITFEEMLEMASLGSKVLQIRSVEFAGKYKVKLRVLSSFEEEGQE 238

Query: 237 GPGTLITIDEEESMEQPIISGIAFNRDEAKLTIRGVPDTPGVAFKILGPISGANIEVDMI 296
             GTLIT++E+ +MEQPIISGIAFNRDEAKLT+ GVPD PG+A++ILGPI+ ANI+VDMI
Sbjct: 239 TSGTLITLEEDTTMEQPIISGIAFNRDEAKLTVLGVPDRPGIAYQILGPIADANIDVDMI 298

Query: 297 VQNVSHDNTTDFTFTVHRNEYDAAERILQNTAK-EIGAREVVGDTKIAKVSIVGVGMRSH 355
           +QNV HD TTDF+FTV+R+E+   +++L++  K  IGAR + GD KI KVS VGVGMRSH
Sbjct: 299 IQNVGHDGTTDFSFTVNRSEFARTKKLLEDQIKPHIGARAIEGDNKICKVSAVGVGMRSH 358

Query: 356 AGVASRMFEALAKESINIQMISTSEIKVSVVIEEKYLELAVRALHTAFELD 406
            GVAS+MF  LA+E INIQMISTSEIK+SVV++EKYLELAVR LH  FELD
Sbjct: 359 PGVASKMFRTLAEEGINIQMISTSEIKISVVVDEKYLELAVRVLHKVFELD 409


Lambda     K      H
   0.316    0.133    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 559
Number of extensions: 14
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 413
Length adjustment: 31
Effective length of query: 382
Effective length of database: 382
Effective search space:   145924
Effective search space used:   145924
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)

Align candidate WP_041099485.1 SUTH_RS11835 (aspartate kinase)
to HMM TIGR00656 (aspartate kinase, monofunctional class (EC 2.7.2.4))

Software error:

../bin/blast/fastacmd -i /tmp/list.28384.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.28384.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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