Alignments for a candidate for trpE in Sulfuritalea hydrogenivorans DSM 22779

Align anthranilate synthase (subunit 1/2) (EC 4.1.3.27) (characterized)
to candidate WP_041100199.1 SUTH_RS14335 anthranilate synthase component I

Query= BRENDA::P20580
         (492 letters)



>NCBI__GCF_000828635.1:WP_041100199.1
          Length = 495

 Score =  557 bits (1435), Expect = e-163
 Identities = 287/496 (57%), Positives = 364/496 (73%), Gaps = 9/496 (1%)

Query: 1   MNREEFLRLAADGYNRIPLSFETLADFDTPLSIYLKLADAPNSYLLESVQGGEKWGRYSI 60
           M   +F RLAA+GYNRIP++ ET AD DTPLSIYLKLA+ P SYLLESVQGGE++GRYS 
Sbjct: 1   MTESDFNRLAAEGYNRIPVTLETFADLDTPLSIYLKLANDPYSYLLESVQGGERFGRYSF 60

Query: 61  IGLPCRTVLRVYDHQVRISIDGVETERFDCADPLAFVEEFKARYQVPTVPGLPRFDGGLV 120
           IGL   T + V D  + +       ER D  +P++F+ EF AR++VP +PGLPRF GGLV
Sbjct: 61  IGLAASTRIAVVDGAIMVLSGNRVAERRDHTNPMSFISEFMARFKVPDLPGLPRFCGGLV 120

Query: 121 GYFGYDCVRYVEKRLATCPNPDPLGNPDILLMVSDAVVVFDNLAGKIHAIVLADPSEENA 180
           G FGYD VRY+E +LA   +PDPLG PDILL++S+ + + DNL+GK+  +V A+P    A
Sbjct: 121 GAFGYDTVRYIETKLARDKSPDPLGVPDILLLLSEEIAIVDNLSGKLTLVVYAEPGFPGA 180

Query: 181 YERGQARLEELLERLRQPITPRRGLDLEAAQGREPAFRASFTREDYENAVGRIKDYILAG 240
           +++ QARL+ELL +LR P+     +  E      PA  + F  E ++ AV R K YI+ G
Sbjct: 181 WKQTQARLKELLAKLRAPVA----IPPEVQASSAPAV-SEFGEEAFKAAVRRAKQYIVDG 235

Query: 241 DCMQVVPSQRMSIEFKAAPIDLYRALRCFNPTPYMYFFNFGDFHVVGSSPEVLVRVE--- 297
           D MQVV SQRMS  F A+P+ LYRALR  NP+PYM++FNF DFHVVG+SPE+LVR+E   
Sbjct: 236 DVMQVVLSQRMSKPFAASPLALYRALRTLNPSPYMFYFNFEDFHVVGASPEILVRLEHQN 295

Query: 298 -DGLVTVRPIAGTRPRGINEEADLALEQDLLSDAKEIAEHLMLIDLGRNDVGRVSDIGAV 356
            +  VTVRPIAGTR RG     D AL  DLL+D KE AEHLML+DLGRND+GRV+  G V
Sbjct: 296 GEKRVTVRPIAGTRKRGATLAEDEALAADLLADPKERAEHLMLLDLGRNDIGRVAKTGTV 355

Query: 357 KVTEKMVIERYSNVMHIVSNVTGQLREGLSAMDALRAILPAGTLSGAPKIRAMEIIDELE 416
           KVT++ +IERYS+VMHIVSNV  +L++   A+  L+A  PAGT+SGAPK+RAMEIIDELE
Sbjct: 356 KVTDQFIIERYSHVMHIVSNVEAELKDDEGALGVLKATFPAGTVSGAPKVRAMEIIDELE 415

Query: 417 PVKRGVYGGAVGYLAWNGNMDTAIAIRTAVIKNGELHVQAGGGIVADSVPALEWEETINK 476
           P KRG+Y G+VGYL +NG+MD  IAIRTAV+K+G++HVQAG GIVADS P  EW+ET+NK
Sbjct: 416 PSKRGIYAGSVGYLGFNGDMDLCIAIRTAVVKDGQIHVQAGAGIVADSDPDSEWQETLNK 475

Query: 477 RRAMFRAVALAEQSVE 492
            RA  RA  +AE  ++
Sbjct: 476 ARAQLRAAEMAEAGLD 491


Lambda     K      H
   0.321    0.139    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 687
Number of extensions: 26
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 495
Length adjustment: 34
Effective length of query: 458
Effective length of database: 461
Effective search space:   211138
Effective search space used:   211138
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)

Align candidate WP_041100199.1 SUTH_RS14335 (anthranilate synthase component I)
to HMM TIGR00564 (trpE: anthranilate synthase component I (EC 4.1.3.27))

Software error:

../bin/blast/fastacmd -i /tmp/list.14709.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.14709.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.