Alignments for a candidate for hisC in Stenotrophomonas chelatiphaga DSM 21508

Align Histidinol-phosphate aminotransferase; Imidazole acetol-phosphate transaminase; HPAT; HspAT; EC 2.6.1.9 (characterized)
to candidate WP_057506749.1 ABB28_RS00535 histidinol-phosphate transaminase

Query= SwissProt::P06986
         (356 letters)



>NCBI__GCF_001431535.1:WP_057506749.1
          Length = 364

 Score =  273 bits (698), Expect = 5e-78
 Identities = 150/357 (42%), Positives = 212/357 (59%), Gaps = 6/357 (1%)

Query: 2   STVTITDLARENVRNLTPYQSARRLGGNGDVWLNANEYPTAVEFQLTQQTLNRYPECQPK 61
           S   +  L R ++++   Y SAR     GDVWLNANE   A     +  +  RYP+ QP 
Sbjct: 4   SVQDVLALLRPDLQSFAGYSSARSTALQGDVWLNANESAWANPADASGSS-RRYPDPQPP 62

Query: 62  AVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIG 121
           A+++  A   GV P+Q+LV RG+DE I+LL+RAFC PG DA+L  PP +GMY+V A   G
Sbjct: 63  ALLQALAGLYGVSPQQLLVGRGSDEAIDLLVRAFCRPGVDAVLATPPVFGMYAVCARLQG 122

Query: 122 VECRTVPTLDN---WQLDLQGI--SDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTR 176
                VP +D+    Q+DL  +  + +  G ++V++CSP+NP G  I+  D     +  +
Sbjct: 123 APLLEVPLVDSPAGLQVDLDAVIATARGQGARLVFLCSPSNPAGSEISAADIARTAQALQ 182

Query: 177 GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLL 236
           G+A+VV DEAYIE+  Q S    LA YP+LA+LRTLSKA ALA  R G  +A  E+I  L
Sbjct: 183 GQAVVVVDEAYIEYSGQPSATALLAHYPNLAVLRTLSKAHALAAARVGSLIAAPEIIAAL 242

Query: 237 MKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSE 296
            +  APYP+  P A++A  AL P  + A R R+  ++ ER  L  AL  +  V QV+ S 
Sbjct: 243 RRCQAPYPVPQPCAELAVAALQPAALAATRARIDDVVRERARLSDALAGVDGVRQVYPSA 302

Query: 297 TNYILARFKASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDALRA 353
            NY+L RF  +   F +L   G+++RDQ   P L   LRI++G+ +E+QRV+ AL A
Sbjct: 303 GNYLLVRFDDAQGAFDALLAAGVVVRDQRAAPQLGDALRISIGSTDENQRVLAALSA 359


Lambda     K      H
   0.319    0.135    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 386
Number of extensions: 17
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 364
Length adjustment: 29
Effective length of query: 327
Effective length of database: 335
Effective search space:   109545
Effective search space used:   109545
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)

Align candidate WP_057506749.1 ABB28_RS00535 (histidinol-phosphate transaminase)
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))

Software error:

../bin/blast/fastacmd -i /tmp/list.30456.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.30456.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.