Alignments for a candidate for hisE in Stenotrophomonas chelatiphaga DSM 21508

Align putative bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC 3.5.4.19; EC 3.6.1.31) (characterized)
to candidate WP_057506754.1 ABB28_RS00560 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE

Query= metacyc::HISTCYCLOPRATPPHOS
         (203 letters)



>NCBI__GCF_001431535.1:WP_057506754.1
          Length = 206

 Score =  214 bits (546), Expect = 7e-61
 Identities = 114/194 (58%), Positives = 137/194 (70%), Gaps = 2/194 (1%)

Query: 10  LDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDKTLESGKVTFFSRTKQRLWTKGETSG 69
           LDW K DGL+P ++Q A S +VLMLGY++ E+L  TL++G +TFFSR+KQRLWTKGE SG
Sbjct: 15  LDWSKGDGLLPAVLQDADSLQVLMLGYVSAESLQVTLQTGHMTFFSRSKQRLWTKGEQSG 74

Query: 70  NFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTSSCFGDTAHQWLFLYQLEQLLAERKSAD 129
           N L V SIA DCD DTLLV A P GPTCH G  SCF        F+ QL+QL+A R++  
Sbjct: 75  NVLAVQSIAVDCDADTLLVRARPAGPTCHTGADSCFPQAPKD--FIGQLDQLVATREAQR 132

Query: 130 PETSYTAKLYASGTKRIAQKVGEEGVETALAATVHDRFELTNEASDLMYHLLVLLQDQGL 189
           P  SYT  L+  G +RIAQKVGEEGVETALAA V    EL  EASDL++HLLVLL+ +GL
Sbjct: 133 PAGSYTTSLFDGGIRRIAQKVGEEGVETALAAVVQGDDELLGEASDLVFHLLVLLRARGL 192

Query: 190 DLTTVIENLRKRHQ 203
            L  V   L  RH+
Sbjct: 193 GLQDVRTLLESRHR 206


Lambda     K      H
   0.317    0.132    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 120
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 206
Length adjustment: 21
Effective length of query: 182
Effective length of database: 185
Effective search space:    33670
Effective search space used:    33670
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)

Align candidate WP_057506754.1 ABB28_RS00560 (bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE)
to HMM PF01502 (PRA-CH)

Software error:

../bin/blast/fastacmd -i /tmp/list.22451.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.22451.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.