Align Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 (characterized)
to candidate WP_042614861.1 ABB28_RS08010 ribose-phosphate diphosphokinase
Query= SwissProt::P0A1V6
(315 letters)
>NCBI__GCF_001431535.1:WP_042614861.1
Length = 319
Score = 378 bits (970), Expect = e-109
Identities = 189/313 (60%), Positives = 242/313 (77%), Gaps = 1/313 (0%)
Query: 2 PDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCA 61
P++ +F+GNA LAQ I L G A V FSDGEV V+I ENVR D+F+IQ T A
Sbjct: 5 PNLLVFSGNANKRLAQNICKELGVRPGKALVSHFSDGEVQVEIEENVRKQDVFVIQPTSA 64
Query: 62 PTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSSVG 121
P+ +NLMEL+V++DAL+RAS +TAV+PYFGY+RQDRR+RS+RVPITAK+ A S+ G
Sbjct: 65 PSAENLMELLVLIDALKRASVASVTAVVPYFGYSRQDRRMRSSRVPITAKLAAKMFSTAG 124
Query: 122 VDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQ-LNLDNPIVVSPDIGGVVRARAI 180
DRVLTVDLHA+QIQGFFD+PVDNV+ SP+LL D+ + +N IVVSPD+GGVVRARA+
Sbjct: 125 ADRVLTVDLHADQIQGFFDIPVDNVYASPLLLADIWRAYGTENLIVVSPDVGGVVRARAV 184
Query: 181 AKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVLVDDMIDTGGTLCKAAEALKERG 240
AK L+D D+AIIDKRRPRANVS VM+IIGDV G+ CV+VDD++DT GTLC AA ALK RG
Sbjct: 185 AKRLDDADLAIIDKRRPRANVSTVMNIIGDVEGKTCVMVDDIVDTAGTLCAAAAALKARG 244
Query: 241 AKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIPLTDEIKALPNVRTLTLSGMLAEAI 300
A +V AY TH + SG A +N+ NS +DE+VV DTIPL D + +R L+++ MLAE +
Sbjct: 245 ALKVAAYCTHAVLSGPAVDNITNSQLDELVVTDTIPLKDAARVCSKIRQLSVAEMLAETM 304
Query: 301 RRISNEESISAMF 313
RRI+ ES+S+++
Sbjct: 305 RRIAFGESVSSLY 317
Lambda K H
0.322 0.137 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 306
Number of extensions: 8
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 319
Length adjustment: 27
Effective length of query: 288
Effective length of database: 292
Effective search space: 84096
Effective search space used: 84096
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)
Align candidate WP_042614861.1 ABB28_RS08010 (ribose-phosphate diphosphokinase)
to HMM TIGR01251 (prs: ribose-phosphate diphosphokinase (EC 2.7.6.1))
../bin/blast/fastacmd -i /tmp/list.23713.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.23713.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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