Align Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 (characterized)
to candidate WP_057509298.1 ABB28_RS14475 acetolactate synthase 2 catalytic subunit
Query= SwissProt::P0DP90
(548 letters)
>NCBI__GCF_001431535.1:WP_057509298.1
Length = 578
Score = 647 bits (1669), Expect = 0.0
Identities = 327/553 (59%), Positives = 403/553 (72%), Gaps = 11/553 (1%)
Query: 2 NGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHLLCRHEQGAAMAAIGYARAT 61
NGA+W+ AL A+GV T+FGYPGG IMP YDAL D ++H+L RHEQGAA+AA G+ARA+
Sbjct: 12 NGARWLTQALEAEGVQTLFGYPGGTIMPFYDALVDSRLKHVLVRHEQGAALAANGFARAS 71
Query: 62 GKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAPFIGTDAFQEVDVLGLSLAC 121
G+ GVCIATSGPGA+NL+TG+ADA+LDS+P+V ITGQV+ P +GTDAFQE+DV GL+L
Sbjct: 72 GRVGVCIATSGPGASNLVTGIADAMLDSVPMVCITGQVATPLLGTDAFQELDVFGLTLPI 131
Query: 122 TKHSFLVQSLEELPRIMAEAFDVACSGRPGPVLVDIPKDIQLASGDLEPWFTTVENEVTF 181
KHS+LV+S+++LPR++AEAF +A GRPGPVL+D+PKD+Q+A P V V
Sbjct: 132 VKHSWLVRSVDDLPRVVAEAFRIAREGRPGPVLIDLPKDVQVADASHLP--AHVPATVEA 189
Query: 182 PHAEVEQARQ----MLAKAQKPMLYVGGGVGMAQAVPALREFLAATKMPATCTLKGLGAV 237
P A EQA +A A+KP++Y GGG+ + AV ALR+F AA+ +PA TL+GLGA+
Sbjct: 190 PPAPAEQAIADAIAAIAGAEKPVIYAGGGIALGDAVDALRDFAAASGIPAVLTLRGLGAL 249
Query: 238 EADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDRVTGKLNTFAPHASVIHMDIDP 297
A +P LGMLGMHGT+AAN AVQE DLL+ +GARFDDR TGKL FAP A V+H+D D
Sbjct: 250 PAGHPQSLGMLGMHGTRAANMAVQEADLLLVLGARFDDRATGKLTEFAPFARVVHIDADA 309
Query: 298 AEMNKLRQAHVALQGDLNALLPALQQ-----PLNQYDWQQHCAQLRDEHSWRYDHPGDAI 352
E++KLR A VA+ G++ + AL P Q W+ CAQ R++ RYD PG I
Sbjct: 310 YEISKLRTADVAVPGNVAQAIRALHAAFPAPPATQAAWRNRCAQHREKFIARYDAPGKHI 369
Query: 353 YAPLLLKQLSDRKPADCVVTTDVGQHQMWAAQHIAHTRPENFITSSGLGTMGFGLPAAVG 412
YAP LLK+LS+ PAD V+ DVGQHQMW AQH P N +TS LGTMGFGLPAA+G
Sbjct: 370 YAPALLKRLSELAPADAVIACDVGQHQMWVAQHCRFNHPRNHLTSGALGTMGFGLPAAMG 429
Query: 413 AQVARPNDTVVCISGDGSFMMNVQELGTVKRKQLPLKIVLLDNQRLGMVRQWQQLFFQER 472
AQ A P+ TVV +SGDGSFMMNVQEL T+ R +LP+KIVLLDN LGMVRQWQ+LFF ER
Sbjct: 430 AQFACPDRTVVLVSGDGSFMMNVQELTTIARCRLPVKIVLLDNSSLGMVRQWQELFFAER 489
Query: 473 YSETTLTDNPDFLMLASAFGIHGQHITRKDQVEAALDTMLNSDGPYLLHVSIDELENVWP 532
YSE L+DNPDF+ LA FGI I +D VE L +L GP LLHV+ID NVWP
Sbjct: 490 YSEIDLSDNPDFVALAKVFGIAATRIDARDDVEGGLAALLAEPGPALLHVAIDARANVWP 549
Query: 533 LVPPGASNSEMLE 545
LVPP +NS MLE
Sbjct: 550 LVPPNTANSTMLE 562
Lambda K H
0.320 0.135 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 958
Number of extensions: 38
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 578
Length adjustment: 36
Effective length of query: 512
Effective length of database: 542
Effective search space: 277504
Effective search space used: 277504
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)
Align candidate WP_057509298.1 ABB28_RS14475 (acetolactate synthase 2 catalytic subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.8354.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.8354.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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