Align Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic; AK-HD 1; AK-HSDH 1; Beta-aspartyl phosphate homoserine 1; EC 2.7.2.4; EC 1.1.1.3 (characterized)
to candidate WP_245625232.1 ABB28_RS00495 bifunctional aspartate kinase/homoserine dehydrogenase I
Query= SwissProt::Q9SA18
(911 letters)
>NCBI__GCF_001431535.1:WP_245625232.1
Length = 835
Score = 648 bits (1671), Expect = 0.0
Identities = 365/824 (44%), Positives = 514/824 (62%), Gaps = 13/824 (1%)
Query: 86 VHKFGGTCVGNSERIKDVAAVVVKDDSERKLVVVSAMSKVTDMMYDLIHRAESRDDSYLS 145
VHKFGGT V +++ + VA ++ ++ VVSAM VTD + L A + D +
Sbjct: 23 VHKFGGTSVADADCYRHVARLLQARPEALQVTVVSAMKGVTDALIALARLAAAGDAQWRE 82
Query: 146 ALSGVLEKHRATAVDLLDGDELSSFLARLNDDINNLKAMLRAIYIAGHATESFSDFVVGH 205
+ +HR A LL G+ + + L+ + L +L A+ + G E D V G
Sbjct: 83 DWHDLRARHRGAAASLL-GEHAGASVEWLDARFDELAELLAALAVIGGLPEEVLDRVQGL 141
Query: 206 GELWSAQMLAAVVRKSGLDCTWMDARDVLVVIPTSSNQVDPDFVESEKRLEKWFTQNSAK 265
GE+ SA +L + SG C +DAR+VLVV V+ D+ S +RL W N +
Sbjct: 142 GEVCSAHLLGQHFQASGEPCAVLDAREVLVV-EHGELGVNVDWETSAQRLHAWRQANVQQ 200
Query: 266 IIIATGFIASTPQNIPTTLKRDGSDFSAAIMSALFRSHQLTIWTDVDGVYSADPRKVSEA 325
I+ TGFIA ++ TTL R+GSD+S AI +ALF + +L IWTDVDGV SADPR V EA
Sbjct: 201 RIVVTGFIARDRRDRITTLGRNGSDYSGAIFAALFNADELQIWTDVDGVLSADPRLVPEA 260
Query: 326 VVLKTLSYQEAWEMSYFGANVLHPRTIIPVMKYDIPIVIRNIFNLSAPGTMICRQIDDED 385
V L+ LSY EA E++YFGA V+HP+T+ P ++ +PI+IRN F PGT I +
Sbjct: 261 VQLEALSYDEACELAYFGAKVVHPQTMSPAIQRGLPILIRNTFQPEHPGTRITAERS--- 317
Query: 386 GFKLDAPVKGFATIDNLALVNVEGTGMAGVPGTASAIFSAVKEVGANVIMISQASSEHSV 445
+ P+KG LA++N+EGTG+ GVPGTA +FSA+++ +V+MISQ SSEHS+
Sbjct: 318 ---VRGPIKGLTLSAELAVLNLEGTGLIGVPGTAERVFSALRQAQVSVVMISQGSSEHSI 374
Query: 446 CFAVPEKEVKAVSEALNSRFRQALAGGRLSQIEIIPNCSILAAVGQKMASTPGVSATFFN 505
C V E + +AL F LA G++ ++++ S+LAAVG MA PGV+A F
Sbjct: 375 CCVVRGNESERGRDALLQAFAHELAVGQVQRVQLRGGVSVLAAVGDGMAGQPGVAARLFE 434
Query: 506 ALAKANINIRAIAQGCSEFNITVVVKREDCIRALRAVHSRFYLSRTTLAVGIIGPGLIGG 565
+L +A +NI AIAQG SE NI+V V D RALRA H+ F+LS T AVG+IGPG +G
Sbjct: 435 SLGRAQVNILAIAQGSSERNISVAVDSGDATRALRAAHAGFWLSPQTFAVGVIGPGNVGA 494
Query: 566 TLLDQIRDQAAVLKEEFKIDLRVIGITGSSKMLMSESGIDLSRWRELMKEEGEKADMEKF 625
LLDQ++ L + IDLR+ + M ++ + WR + + +D++ F
Sbjct: 495 ALLDQLQAAQPQLLGKANIDLRLRAVASRRGMHLAPRALQ-GPWRAALADAASASDLDAF 553
Query: 626 TQYVKGNHFIPNSVMVDCTADADIASCYYDWLLRGIHVVTPNKKANSGPLDQYLKIRDLQ 685
T ++ H +P++V++DC+ A++A Y WL GIHVVTPNK+A SGPL +Y IR
Sbjct: 554 TAHLLSAH-LPHAVVIDCSGSAEVAGRYEGWLAAGIHVVTPNKQAGSGPLARYQSIRAAA 612
Query: 686 RKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYLFNNFVGTRSFSEV 745
S + YEATVGAGLP+I+TLR L++TGD++L IEGIFSGTL++LFN F G++ FS +
Sbjct: 613 AASGARFRYEATVGAGLPVITTLRDLVDTGDEVLSIEGIFSGTLAWLFNRFDGSQPFSAL 672
Query: 746 VAEAKQAGFTEPDPRDDLSGTDVARKVTILARESGLKLDLEGLPVQNLVPKPLQACASAE 805
V +A+ G+TEPDPRDDLSG DVARK+ ILARE+G L LE + V++LVP+ L+A S +
Sbjct: 673 VEQARGMGYTEPDPRDDLSGIDVARKLVILAREAGRDLSLEQVQVESLVPEALRA-GSVD 731
Query: 806 EFMEKLPQFDEELSKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDHPFAQLSGAD 865
FM++L D+ L ++ ++A A G VLRYV + A + +V L DH FA L D
Sbjct: 732 AFMQRLGDNDDALLQRLQQARARGAVLRYVAALSA--QGASVGLVEIPLDHAFANLKLTD 789
Query: 866 NIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLAFYLGA 909
N++ F T+RY + PL+V+GPGAG +VTA G+F+D+LR+A GA
Sbjct: 790 NVVQFRTRRYCDNPLVVQGPGAGPEVTAAGVFADLLRVAAGEGA 833
Lambda K H
0.319 0.134 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1479
Number of extensions: 55
Number of successful extensions: 9
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 911
Length of database: 835
Length adjustment: 42
Effective length of query: 869
Effective length of database: 793
Effective search space: 689117
Effective search space used: 689117
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)
Align candidate WP_245625232.1 ABB28_RS00495 (bifunctional aspartate kinase/homoserine dehydrogenase I)
to HMM TIGR00657 (aspartate kinase (EC 2.7.2.4))
../bin/blast/fastacmd -i /tmp/list.824.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.824.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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