Alignments for a candidate for trpD_1 in Stenotrophomonas chelatiphaga DSM 21508

Align anthranilate synthase (subunit 2/2) (EC 4.1.3.27) (characterized)
to candidate WP_057509109.1 ABB28_RS13450 aminodeoxychorismate/anthranilate synthase component II

Query= BRENDA::P20576
         (201 letters)



>NCBI__GCF_001431535.1:WP_057509109.1
          Length = 192

 Score =  268 bits (684), Expect = 6e-77
 Identities = 129/192 (67%), Positives = 152/192 (79%)

Query: 1   MLLMIDNYDSFTYNLVQYFGELKAEVKVVRNDELSVEQIEALAPERIVLSPGPCTPNEAG 60
           ML MIDNYDSFTYNLVQY   L AEVKVVRND ++V++I A  P RIV+SPGPCTPNEAG
Sbjct: 1   MLWMIDNYDSFTYNLVQYLQTLGAEVKVVRNDAMTVDEIAAQKPGRIVISPGPCTPNEAG 60

Query: 61  VSLAVIERFAGKLPLLGVCLGHQSIGQAFGGEVVRARQVMHGKTSPIHHKDLGVFAGLAN 120
           +SL +I+R     P+LGVCLGHQ IGQ +GG V+RA  +MHGKTSPI H+  GVFAGL +
Sbjct: 61  ISLELIQRLGPTTPILGVCLGHQGIGQVYGGTVIRAGNIMHGKTSPIRHEGKGVFAGLPD 120

Query: 121 PLTVTRYHSLVVKRESLPECLEVTAWTQHADGSLDEIMGVRHKTLNVEGVQFHPESILTE 180
               TRYHSLVV +  LP CLEVTAWT++ DGS++EIMG+RH+   VEGVQFHPESILTE
Sbjct: 121 RYQATRYHSLVVDKTRLPACLEVTAWTENEDGSVEEIMGLRHREHPVEGVQFHPESILTE 180

Query: 181 QGHELLANFLRQ 192
            GH LL NFL++
Sbjct: 181 HGHALLRNFLQR 192


Lambda     K      H
   0.319    0.137    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 195
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 192
Length adjustment: 20
Effective length of query: 181
Effective length of database: 172
Effective search space:    31132
Effective search space used:    31132
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)

Align candidate WP_057509109.1 ABB28_RS13450 (aminodeoxychorismate/anthranilate synthase component II)
to HMM TIGR00566 (glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase)

Software error:

../bin/blast/fastacmd -i /tmp/list.17508.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.17508.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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