Alignments for a candidate for trpE in Stenotrophomonas chelatiphaga DSM 21508

Align anthranilate synthase (subunit 1/2) (EC 4.1.3.27) (characterized)
to candidate WP_057509108.1 ABB28_RS13445 anthranilate synthase component I

Query= BRENDA::P20580
         (492 letters)



>NCBI__GCF_001431535.1:WP_057509108.1
          Length = 496

 Score =  548 bits (1412), Expect = e-160
 Identities = 288/492 (58%), Positives = 356/492 (72%), Gaps = 6/492 (1%)

Query: 5   EFLRLAADGYNRIPLSFETLADFDTPLSIYLKLADAPNSYLLESVQGGEKWGRYSIIGLP 64
           +F + AA+G+ RIP+  E L+D DTPLS+YLKLAD P++YL ESV+GGE++GRYSIIGLP
Sbjct: 6   QFQQQAAEGHTRIPVVREVLSDLDTPLSVYLKLADGPHTYLFESVEGGERFGRYSIIGLP 65

Query: 65  CRTVLRVYDHQVRISIDGVETERFDCADPLAFVEEFKARYQVPTVPGLPRFDGGLVGYFG 124
            R V     H + I+  G   E  D ADP A VE  ++ + VP + GLP F GGLVG+FG
Sbjct: 66  ARRVYTFRGHTLTIAEHGQVVETRDVADPFAEVEALRSAHSVPKLDGLPGFTGGLVGWFG 125

Query: 125 YDCVRYVEKRLATCPNPDPLGNPDILLMVSDAVVVFDNLAGKIHAIVLADPSEENAYERG 184
           ++C+ Y+E RLA     D LG PDILLM S+ + VFDNL G+++ IV ADP +  A++  
Sbjct: 126 FECIGYIEPRLAPPAGRDELGTPDILLMHSEELAVFDNLKGRLYLIVHADPRQPGAWDEA 185

Query: 185 QARLEELLERLRQPITPRRGLDLEAAQGREPAFRASFTREDYENAVGRIKDYILAGDCMQ 244
           QARL+ L  +LR P        L +    E  F + FTRE + +AV R KDYI +GD  Q
Sbjct: 186 QARLDALAGKLRAPGAGYPA-PLHSDVLDEGDFISGFTREGFIDAVERSKDYIRSGDIFQ 244

Query: 245 VVPSQRMSIEFKAAPIDLYRALRCFNPTPYMYFFNFGDFHVVGSSPEVLVRVED-----G 299
           VV SQR+S+ FKA P+D+YRALR  NP+PYMYF + GD  VVGSSPE+LVR++      G
Sbjct: 245 VVLSQRLSVPFKARPVDVYRALRALNPSPYMYFLDVGDMQVVGSSPEILVRLQHDAEGVG 304

Query: 300 LVTVRPIAGTRPRGINEEADLALEQDLLSDAKEIAEHLMLIDLGRNDVGRVSDIGAVKVT 359
            VTVRPIAGTRPRG   E D ALE +LL+D KE AEHLMLIDLGRND GRVS  G V+V 
Sbjct: 305 HVTVRPIAGTRPRGATVEEDNALEAELLADPKERAEHLMLIDLGRNDAGRVSRAGTVEVG 364

Query: 360 EKMVIERYSNVMHIVSNVTGQLREGLSAMDALRAILPAGTLSGAPKIRAMEIIDELEPVK 419
           E+ VIERYS+VMHIVS VTGQL+ GLS  D LRA  PAGT+SGAPKIRA+E+I ELEP+K
Sbjct: 365 EQFVIERYSHVMHIVSEVTGQLQPGLSYADVLRATFPAGTVSGAPKIRALEVIRELEPIK 424

Query: 420 RGVYGGAVGYLAWNGNMDTAIAIRTAVIKNGELHVQAGGGIVADSVPALEWEETINKRRA 479
           R VY G++GY+ W+G+ DTAIAIRTAVIK+G LHVQAG GIV DS P  EW+ET+NK RA
Sbjct: 425 RNVYAGSIGYIGWHGDADTAIAIRTAVIKDGRLHVQAGAGIVYDSDPQKEWDETMNKGRA 484

Query: 480 MFRAVALAEQSV 491
           +FRAVA A + +
Sbjct: 485 LFRAVAQAAKGL 496


Lambda     K      H
   0.321    0.139    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 706
Number of extensions: 36
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 496
Length adjustment: 34
Effective length of query: 458
Effective length of database: 462
Effective search space:   211596
Effective search space used:   211596
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)

Align candidate WP_057509108.1 ABB28_RS13445 (anthranilate synthase component I)
to HMM TIGR00564 (trpE: anthranilate synthase component I (EC 4.1.3.27))

Software error:

../bin/blast/fastacmd -i /tmp/list.7008.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.7008.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.