Alignments for a candidate for PAH in Stenotrophomonas chelatiphaga DSM 21508

Align phenylalanine 4-monooxygenase (EC 1.14.16.1) (characterized)
to candidate WP_057508987.1 ABB28_RS12815 phenylalanine 4-monooxygenase

Query= BRENDA::P30967
         (297 letters)



>NCBI__GCF_001431535.1:WP_057508987.1
          Length = 297

 Score =  375 bits (964), Expect = e-109
 Identities = 179/269 (66%), Positives = 211/269 (78%), Gaps = 2/269 (0%)

Query: 31  QPLDRYSAEDHATWATLYQRQCKLLPGRACDEFMEGLERLEVDADRVPDFNKLNQKLMAA 90
           QP D YSA+DHATW+TL++RQ  LL GRAC EF++  + + + ADR+P F +LN+ L AA
Sbjct: 29  QPWDSYSADDHATWSTLFKRQRDLLNGRACQEFLDAQDAMGMSADRIPRFEQLNEALAAA 88

Query: 91  TGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHVPLLINP 150
           TGW +V V GL+P+  FF+HLANRRFPVTWW+R P Q+DY+ EPD+FHDLFGHVPLL+NP
Sbjct: 89  TGWTLVGVEGLLPELDFFDHLANRRFPVTWWIRRPDQIDYIAEPDMFHDLFGHVPLLMNP 148

Query: 151 VFADYLEAYGKGGVKAKALG--ALPMLARLYWYTVEFGLINTPAGMRIYGAGILSSKSES 208
           VFADY+EAYG+GGVKA ALG  AL  L RLYWYTVEFGLINT  G+RIYGAGI+SSK ES
Sbjct: 149 VFADYMEAYGRGGVKAHALGPDALQNLTRLYWYTVEFGLINTADGLRIYGAGIVSSKGES 208

Query: 209 IYCLDSASPNRVGFDLMRIMNTRYRIDTFQKTYFVIDSFKQLFDATAPDFAPLYLQLADA 268
           +Y L+S +PNR+GFDL RIM TRYRIDTFQKTYFVIDSF+QL  ATAPDF P+Y  LAD 
Sbjct: 209 LYSLESPAPNRIGFDLERIMRTRYRIDTFQKTYFVIDSFEQLMQATAPDFTPIYASLADQ 268

Query: 269 QPWGAGDVAPDDLVLNAGDRQGWADTEDV 297
               AG+V  DD V   G   GWA   DV
Sbjct: 269 PQLPAGEVQADDRVFQRGTGAGWATGGDV 297


Lambda     K      H
   0.323    0.140    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 388
Number of extensions: 15
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 297
Length adjustment: 26
Effective length of query: 271
Effective length of database: 271
Effective search space:    73441
Effective search space used:    73441
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)

Align candidate WP_057508987.1 ABB28_RS12815 (phenylalanine 4-monooxygenase)
to HMM TIGR01267 (phhA: phenylalanine-4-hydroxylase (EC 1.14.16.1))

Software error:

../bin/blast/fastacmd -i /tmp/list.14930.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.14930.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.