Alignments for a candidate for argA in Billgrantia desiderata SP1

Align amino-acid N-acetyltransferase (EC 2.3.1.1) (characterized)
to candidate WP_086509236.1 BZY95_RS06985 amino-acid N-acetyltransferase

Query= BRENDA::P22567
         (432 letters)



>NCBI__GCF_002151265.1:WP_086509236.1
          Length = 437

 Score =  409 bits (1052), Expect = e-119
 Identities = 210/430 (48%), Positives = 283/430 (65%), Gaps = 1/430 (0%)

Query: 4   YVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGSRPQ 63
           +V+W R++SPYIN+HR RTFV+++ GE +       ++ DL LLH+LG RLV+V G RPQ
Sbjct: 7   FVDWFRNSSPYINAHRGRTFVILIEGEAMARGRGEQLIQDLALLHTLGVRLVVVFGIRPQ 66

Query: 64  IEARLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMAASPMQGARLRV 123
           +E  L   G+ PR H    V D   + CV       R+ +EAR S+ +  +P+ G  L  
Sbjct: 67  VEQALNEAGIVPRRHNGRWVADEAIMACVERVAAEQRLWLEARFSLGLPNTPLHGVELTA 126

Query: 124 AGGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLLDERSIVLLSPLGYSPTGEIFNLA 183
             GNLV A+P+GV EG+DY H+GEVRR+    +  LLD  S+VLL PLG+S TGE+F+L 
Sbjct: 127 VSGNLVMAKPLGVREGIDYDHSGEVRRVRVSAVQGLLDRGSLVLLPPLGFSSTGEVFDLD 186

Query: 184 CEDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVRELRPQQV-PAHLQRLGNSYQAELLD 242
             +VA  AA+ L A+KLIL G E GL D +G L R+L P +  P   Q    S QA  + 
Sbjct: 187 AAEVAQHAAMALAADKLILMGEEPGLYDENGALQRQLSPDEAEPLLSQAEPGSEQARHIA 246

Query: 243 AAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQLREAGIEDVGGLIEL 302
           AA  A R GV R+H++S+ +  ALL ELFTR G GT++ + ++EQLR A + D+GGL+EL
Sbjct: 247 AACAAARHGVARTHLLSWHDHDALLGELFTRDGVGTMITRHRYEQLRPAELGDIGGLLEL 306

Query: 303 IRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADSEAGELACLAVNPEY 362
           + PLE +G+LV RSRE LE EI+ + ++ER+G+II CAAL+  A+++ GELACLA++  Y
Sbjct: 307 LEPLERRGMLVPRSRERLEHEIDDYLVIERDGMIIGCAALHRFAEADMGELACLAIHVGY 366

Query: 363 RHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSVERLPAARASLYNFQ 422
           R G RG  LL  IE RAR LGL +LFVLTT TAHWF E GF+PS +E LP  +   YN  
Sbjct: 367 RGGARGSLLLSGIERRARRLGLASLFVLTTHTAHWFVEHGFRPSDIESLPPLKRDTYNHA 426

Query: 423 RNSQVFEKSL 432
           R S++  K L
Sbjct: 427 RKSKILVKPL 436


Lambda     K      H
   0.321    0.138    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 580
Number of extensions: 30
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 437
Length adjustment: 32
Effective length of query: 400
Effective length of database: 405
Effective search space:   162000
Effective search space used:   162000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)

Align candidate WP_086509236.1 BZY95_RS06985 (amino-acid N-acetyltransferase)
to HMM TIGR01890 (argA: amino-acid N-acetyltransferase (EC 2.3.1.1))

Software error:

../bin/blast/fastacmd -i /tmp/list.12663.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.12663.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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