Align Ornithine carbamoyltransferase 1, anabolic; OTCase 1; Ornithine carbamoyltransferase 1, phaseolotoxin-sensitive; SOCT; EC 2.1.3.3 (characterized)
to candidate WP_086510014.1 BZY95_RS11205 ornithine carbamoyltransferase
Query= SwissProt::Q02047
(306 letters)
>NCBI__GCF_002151265.1:WP_086510014.1
Length = 306
Score = 400 bits (1027), Expect = e-116
Identities = 196/300 (65%), Positives = 239/300 (79%), Gaps = 1/300 (0%)
Query: 1 MNARHFLSMMDYTPDELLGLIRRGVELKD-LRIRGELFEPLKNRVLGMIFEKSSTRTRLS 59
M RHFL+++D +PDEL LI+R + +K+ LR +G ++ P NR L MIFEKSSTRTR+S
Sbjct: 1 MATRHFLTLLDLSPDELHYLIQRAITIKNRLRAQGPVYAPFTNRTLAMIFEKSSTRTRVS 60
Query: 60 FEAGMIQLGGQAIFLSHRDTQLGRGEPIADSAKVMSRMLDAVMIRTYAHSNLTEFAANSR 119
FE M GG A+FLS RDTQLGRGEPI D+A+V++ M+D VMIRT++H+ L +AA S
Sbjct: 61 FETAMAHFGGHALFLSPRDTQLGRGEPIEDTARVLAEMVDIVMIRTFSHAGLETYAAASS 120
Query: 120 VPVINGLSDDLHPCQLLADMQTFLEHRGSIKGKTVAWIGDGNNMCNSYIEAAIQFDFQLR 179
VPVIN LSDD HPCQLLAD+ T+ E RGS++G+T WIGDGNNMC+S+I AA QFDFQLR
Sbjct: 121 VPVINALSDDYHPCQLLADVMTWTELRGSVRGRTAVWIGDGNNMCHSWINAARQFDFQLR 180
Query: 180 VACPAGYEPNPEFLALAGERVTIVRDPKAAVAGAHLVSTDVWTSMGQEEETARRMALFAP 239
+ CP GYEP + LA AG+RVT++RDP AAVAGA LV+TDVW SMGQEEE A+R A FA
Sbjct: 181 ICCPEGYEPRQDILAAAGDRVTLLRDPAAAVAGADLVTTDVWASMGQEEEQAKREADFAG 240
Query: 240 FQVTRASLDLAEKDVLFMHCLPAHRGEEISVDLLDDSRSVAWDQAENRLHAQKALLEFLV 299
FQV+ A LDLA+ DVLF+HCLPAHRGEEIS LLDD R+V W +A NRLHAQKAL+EFL+
Sbjct: 241 FQVSEALLDLAKPDVLFLHCLPAHRGEEISETLLDDPRAVVWQEAGNRLHAQKALIEFLL 300
Lambda K H
0.322 0.135 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 315
Number of extensions: 10
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 306
Length adjustment: 27
Effective length of query: 279
Effective length of database: 279
Effective search space: 77841
Effective search space used: 77841
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)
Align candidate WP_086510014.1 BZY95_RS11205 (ornithine carbamoyltransferase)
to HMM TIGR00658 (argF: ornithine carbamoyltransferase (EC 2.1.3.3))
../bin/blast/fastacmd -i /tmp/list.28476.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.28476.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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