Align 3-dehydroquinate dehydratase (EC 4.2.1.10) (characterized)
to candidate WP_086508624.1 BZY95_RS03630 type II 3-dehydroquinate dehydratase
Query= BRENDA::A0A124C1Y7
(157 letters)
>NCBI__GCF_002151265.1:WP_086508624.1
Length = 147
Score = 171 bits (432), Expect = 6e-48
Identities = 88/144 (61%), Positives = 106/144 (73%), Gaps = 2/144 (1%)
Query: 10 IMILNGPNLNLLGQRQPEIYGSDTLADVEALCVKAAATHGGTVDFRQSNHEGELVDWIHE 69
+++L+GPNLNLLG RQPE+YG +TL D+ + AA +G + QSNHEG L+D IH
Sbjct: 4 VLVLHGPNLNLLGSRQPEVYGYETLDDINNALYEKAAINGWDIKALQSNHEGVLIDAIHA 63
Query: 70 ARMD-HCGIVINPGAYSHTSVAILDALNTCDGLPVIEVHISNIHKREAFRHHSYVSLRAD 128
AR D IVINP AY+HTSVAILDALN DG VIEVH+SN+HKRE FRHHSYVSLRAD
Sbjct: 64 AREDGTAAIVINPAAYTHTSVAILDALNAFDG-KVIEVHLSNVHKRERFRHHSYVSLRAD 122
Query: 129 GVIAGCGVQGYVFGVERVAALAGE 152
GVIAG G QGY+ ++ V A +
Sbjct: 123 GVIAGLGSQGYLAALDAVIKAAAK 146
Lambda K H
0.321 0.137 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 118
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 147
Length adjustment: 17
Effective length of query: 140
Effective length of database: 130
Effective search space: 18200
Effective search space used: 18200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 43 (21.2 bits)
Align candidate WP_086508624.1 BZY95_RS03630 (type II 3-dehydroquinate dehydratase)
to HMM TIGR01088 (aroQ: 3-dehydroquinate dehydratase, type II (EC 4.2.1.10))
../bin/blast/fastacmd -i /tmp/list.32488.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.32488.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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