Align Phosphoribosyl-AMP cyclohydrolase; PRA-CH; EC 3.5.4.19 (characterized)
to candidate WP_086511320.1 BZY95_RS18250 phosphoribosyl-AMP cyclohydrolase
Query= SwissProt::O26347
(138 letters)
>NCBI__GCF_002151265.1:WP_086511320.1
Length = 150
Score = 139 bits (350), Expect = 2e-38
Identities = 64/118 (54%), Positives = 87/118 (73%), Gaps = 2/118 (1%)
Query: 19 NGEDLIIAVAQDHETGEVLMVAYMNREALRRTLETGTAHYWSTSRGKLWLKGESSGHVQR 78
N + LI A+AQ H++GEVLM+A+MNREAL TL +G YWS SRGKLW KGESSG Q
Sbjct: 29 NQDGLIPAIAQQHDSGEVLMMAWMNREALEETLASGRVCYWSRSRGKLWRKGESSGQQQH 88
Query: 79 VKDVLVDCDGDAVVLKVEQEGGACHTGYRSCFYRSIDGDELKVREDAVKVFDPEEIYG 136
++ +DCDGD ++L+VEQ G ACHTG RSCFY +++G+E ++ + + DP+ +YG
Sbjct: 89 LRAASLDCDGDTLLLQVEQNGPACHTGRRSCFYVALEGEEARITSE--PLIDPDTLYG 144
Lambda K H
0.318 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 82
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 138
Length of database: 150
Length adjustment: 16
Effective length of query: 122
Effective length of database: 134
Effective search space: 16348
Effective search space used: 16348
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 42 (20.8 bits)
Align candidate WP_086511320.1 BZY95_RS18250 (phosphoribosyl-AMP cyclohydrolase)
to HMM PF01502 (PRA-CH)
../bin/blast/fastacmd -i /tmp/list.18956.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.18956.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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