Align phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (characterized)
to candidate WP_086509319.1 BZY95_RS07450 phosphoribosyl-ATP diphosphatase
Query= reanno::Marino:GFF3253
(109 letters)
>NCBI__GCF_002151265.1:WP_086509319.1
Length = 111
Score = 141 bits (356), Expect = 2e-39
Identities = 75/111 (67%), Positives = 87/111 (78%), Gaps = 2/111 (1%)
Query: 1 MSDVLENLARVLEARKEADPETSYVASLHAKGLNKILEKVGEECTETLLAAKDAEHSG-- 58
M D+L+ L VL R+ ADP SYVA+LH KGLNKILEKVGEE TETLLAAKDAE G
Sbjct: 1 MRDILDELFDVLSQRRSADPAESYVAALHDKGLNKILEKVGEEATETLLAAKDAETGGDD 60
Query: 59 ETRDVVYETADLWFHSMVMLSRLGLGPKDILDELASRFDLSGLEEKASRNK 109
E + +V ETADLWFHS+VMLS LGL +D+LDELA RF +SG EEKA+R+K
Sbjct: 61 ERQALVAETADLWFHSLVMLSHLGLDHRDVLDELARRFGISGHEEKAARSK 111
Lambda K H
0.312 0.129 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 4
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 109
Length of database: 111
Length adjustment: 12
Effective length of query: 97
Effective length of database: 99
Effective search space: 9603
Effective search space used: 9603
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.9 bits)
S2: 40 (20.0 bits)
Align candidate WP_086509319.1 BZY95_RS07450 (phosphoribosyl-ATP diphosphatase)
to HMM TIGR03188 (hisE: phosphoribosyl-ATP diphosphatase (EC 3.6.1.31))
../bin/blast/fastacmd -i /tmp/list.22615.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.22615.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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