Alignments for a candidate for prs in Billgrantia desiderata SP1

Align ribose-phosphate diphosphokinase (EC 2.7.6.1) (characterized)
to candidate WP_176342835.1 BZY95_RS10555 ribose-phosphate pyrophosphokinase

Query= BRENDA::P0A719
         (315 letters)



>NCBI__GCF_002151265.1:WP_176342835.1
          Length = 313

 Score =  449 bits (1156), Expect = e-131
 Identities = 224/313 (71%), Positives = 269/313 (85%), Gaps = 1/313 (0%)

Query: 1   MPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTC 60
           M  + +FAGNA PELAQ+IA  L T +G+A VG+FSDGE++V+INENVRG D+FI+QSTC
Sbjct: 1   MSKLMVFAGNANPELAQKIAESLDTRMGNATVGQFSDGEIAVEINENVRGKDVFILQSTC 60

Query: 61  APTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSSV 120
           APTNDNLMEL++MVDALRRASA RITAV+PYFGYARQDRRVRSARVPI+AKVVAD +   
Sbjct: 61  APTNDNLMELILMVDALRRASATRITAVVPYFGYARQDRRVRSARVPISAKVVADMMVKA 120

Query: 121 GVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLNLDNPIVVSPDIGGVVRARAI 180
           GVDRV+T+DLHA+QIQGFFDVPVDNV+GSPILL+D+ + N D+ +VVSPD+GGVVRARAI
Sbjct: 121 GVDRVMTMDLHADQIQGFFDVPVDNVYGSPILLDDIERQNYDDLVVVSPDVGGVVRARAI 180

Query: 181 AKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVLVDDMIDTGGTLCKAAEALKERG 240
           AK LN  D+AIIDKRRP+AN +QVMHIIG++  R CV+VDDMIDT GTLCKA +ALKE G
Sbjct: 181 AKQLN-ADLAIIDKRRPQANQAQVMHIIGEIENRTCVVVDDMIDTAGTLCKAGDALKEHG 239

Query: 241 AKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIPLSDEIKSLPNVRTLTLSGMLAEAI 300
           A+RV AYATHPI SG A  N+  SV+DEVVV DTIPLSD  +    +R L+++G++AEAI
Sbjct: 240 ARRVVAYATHPILSGPAVENITGSVLDEVVVTDTIPLSDVARRSGKIRQLSVAGLIAEAI 299

Query: 301 RRISNEESISAMF 313
           RR+SNEES+SAMF
Sbjct: 300 RRVSNEESVSAMF 312


Lambda     K      H
   0.321    0.137    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 363
Number of extensions: 8
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 313
Length adjustment: 27
Effective length of query: 288
Effective length of database: 286
Effective search space:    82368
Effective search space used:    82368
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)

Align candidate WP_176342835.1 BZY95_RS10555 (ribose-phosphate pyrophosphokinase)
to HMM TIGR01251 (prs: ribose-phosphate diphosphokinase (EC 2.7.6.1))

Software error:

../bin/blast/fastacmd -i /tmp/list.29163.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.29163.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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