Align 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Tetrahydrodipicolinate N-succinyltransferase; THDP succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase; EC 2.3.1.117 (characterized)
to candidate WP_086509350.1 BZY95_RS07625 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
Query= SwissProt::G3XD76
(344 letters)
>NCBI__GCF_002151265.1:WP_086509350.1
Length = 341
Score = 464 bits (1193), Expect = e-135
Identities = 234/341 (68%), Positives = 269/341 (78%), Gaps = 1/341 (0%)
Query: 5 LFSLAFGVGTQNRQEAWLEVFYALPLLKPSSEIVAAVAPILGYAAGNQALTFTSQQAYQL 64
+ S AFG+GTQN Q WLE++Y PL KP + +V AV +L +GN A++F + +
Sbjct: 1 MLSFAFGIGTQNTQGDWLEIYYPAPLFKPDASLVEAVGKVLDIPSGNAAVSFLPEHCSDI 60
Query: 65 ADALKGID-AAQSALLSRLAESQKPLVATLLAEDAAPSSTAEAYLKLHLLSHRLVKPHAV 123
A+ALK AQ+ L LA SQ+PLVAT + D P S E YLKLHLLSHRLVKPH +
Sbjct: 61 AEALKAAGHVAQAELAEALAGSQRPLVATFIDSDVPPQSVPEVYLKLHLLSHRLVKPHGL 120
Query: 124 NLSGIFPLLPNVAWTNIGAVDLAELAELQLEARLKGKLLEVFSVDKFPKMTDYVVPAGVR 183
+L+G+F LL NVAWT+ G +D+ EL +L+ARL+G+ L V VDKFPKMTDYVVP+GVR
Sbjct: 121 DLTGMFGLLRNVAWTSEGPIDIEELPARRLKARLEGRALSVDCVDKFPKMTDYVVPSGVR 180
Query: 184 IADTARVRLGAYIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSAGVFVGKGSDLGGGCSTM 243
IADTARVRLGAY+GEGTTVMHEGFVNFNAG EGPGMIEGR+SAGV VGKGSDLGGGCSTM
Sbjct: 181 IADTARVRLGAYLGEGTTVMHEGFVNFNAGAEGPGMIEGRISAGVLVGKGSDLGGGCSTM 240
Query: 244 GTLSGGGNIVISVGEGCLIGANAGIGIPLGDRNIVEAGLYITAGTKVALLDEQNALVKVV 303
GTLSGGGNIVI VGEGCLIGANAGIGIPLGDR VEAGLYITAG KV LLD+Q VK V
Sbjct: 241 GTLSGGGNIVIKVGEGCLIGANAGIGIPLGDRCTVEAGLYITAGAKVTLLDDQGQEVKTV 300
Query: 304 KARDLAGQPDLLFRRNSQNGAVECKTNKTAIELNEALHAHN 344
AR+LAGQ DLL RRNSQNG +EC TNK+AI LNEALHA+N
Sbjct: 301 AARELAGQSDLLLRRNSQNGRIECLTNKSAIALNEALHANN 341
Lambda K H
0.317 0.134 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 400
Number of extensions: 13
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 341
Length adjustment: 29
Effective length of query: 315
Effective length of database: 312
Effective search space: 98280
Effective search space used: 98280
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)
Align candidate WP_086509350.1 BZY95_RS07625 (2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase)
to HMM TIGR03536 (dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117))
../bin/blast/fastacmd -i /tmp/list.12839.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.12839.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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