Alignments for a candidate for asp-kinase in Billgrantia desiderata SP1

Align aspartate kinase (EC 2.7.2.4) (characterized)
to candidate WP_176342944.1 BZY95_RS20540 aspartate kinase

Query= BRENDA::Q57991
         (473 letters)



>NCBI__GCF_002151265.1:WP_176342944.1
          Length = 434

 Score =  144 bits (364), Expect = 4e-39
 Identities = 103/319 (32%), Positives = 166/319 (52%), Gaps = 18/319 (5%)

Query: 1   MTTVMKFGGTSVGSGERIRHVAKIVTKRKKEDDDVVVVVSAMSEVTNALVEISQQALDVR 60
           MTTV KFGG S+   + IRH+  ++ + +  D  +VVVVSAM + TN L  +   A    
Sbjct: 1   MTTVFKFGGASIKDADAIRHLTPLLERHR--DRPLVVVVSAMGKTTNKLEALLAAARG-- 56

Query: 61  DIAKVGD----FIKFIREKHYKAIEEAIKSEEIKEEVKKIIDSRIEELEKVLIGVAYLGE 116
           +    GD      + ++ +H +AIE      +  +  ++ +D+  +EL+       +   
Sbjct: 57  EGGTQGDEYRRCFEALQTEHREAIEALFG--DAADSPRECVDALFDELDAQ--HRRHRDS 112

Query: 117 LTPKSRDYILSFGERLSSPILSGAIRDLGEKSIALEGGEAG--IITDNNFGSARVKRLEV 174
              K  D  + +GE +S+ I++     L    IA +  +A   + TD  + +A +     
Sbjct: 113 DHAKHYDQTVCYGELISTTIVAAW---LNHNDIATDWHDARELVRTDACYQAANLDWSTT 169

Query: 175 KERLLPLLKEGIIPVVT-GFIGTTEEGYITTLGRGGSDYSAALIGYGLDADIIEIWTDVS 233
            E +   L      ++T GFIG T EG  TTLGR GSD+SAA+  + LDA  + IW DV+
Sbjct: 170 AETVRQRLAGSDRVILTQGFIGGTAEGEATTLGREGSDFSAAIFAHCLDAREVVIWKDVT 229

Query: 234 GVYTTDPRLVPTARRIPKLSYIEAMELAYFGAKVLHPRTIEPAMEKGIPILVKNTFEPES 293
           G++  DPR    A ++ ++SY EA E A+ GAKV+HP+T+ P  EK IP+ V++   P++
Sbjct: 230 GLFNADPRRFDNAVQLERISYAEATERAWHGAKVIHPKTLGPLQEKSIPLTVRSFETPDA 289

Query: 294 EGTLITNDMEMSDSIVKAI 312
           E T+I  +      +   I
Sbjct: 290 EPTVIDAERRFDSDVASCI 308


Lambda     K      H
   0.316    0.135    0.364 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 372
Number of extensions: 18
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 434
Length adjustment: 33
Effective length of query: 440
Effective length of database: 401
Effective search space:   176440
Effective search space used:   176440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)

Align candidate WP_176342944.1 BZY95_RS20540 (aspartate kinase)
to HMM TIGR00657 (aspartate kinase (EC 2.7.2.4))

Software error:

../bin/blast/fastacmd -i /tmp/list.28835.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.28835.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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