Alignments for a candidate for ilvE in Billgrantia desiderata SP1

Align Branched-chain amino acid aminotransferase (EC 2.6.1.42) (characterized)
to candidate WP_086511983.1 BZY95_RS21775 branched-chain amino acid transaminase

Query= reanno::psRCH2:GFF445
         (307 letters)



>NCBI__GCF_002151265.1:WP_086511983.1
          Length = 322

 Score =  343 bits (880), Expect = 3e-99
 Identities = 167/304 (54%), Positives = 220/304 (72%), Gaps = 11/304 (3%)

Query: 5   DRDGVIWYDGELVQWRDATTHVLTHTLHYGMGVFEGVRAYNTPDGTAIFRLQAHTDRLFD 64
           DRDG IW DGE + WRDA TH+LTHTLHYGMG FEGVRAY    GT +FR+  HT RL D
Sbjct: 6   DRDGWIWLDGEWLPWRDAKTHLLTHTLHYGMGCFEGVRAYAGAHGTHLFRVAEHTRRLLD 65

Query: 65  SAHIMNMPMPYSKEEINEATRAAVRENNLESAYIRPMVFYGSEGMGLRASGLKVHVIVAA 124
           SAH +++P+ + +E + EA R  +  N L +AY++P VF+G+EG+GLRA GL VHV++AA
Sbjct: 66  SAHALDIPVAFDEEVLIEAQRQCLVRNELRNAYLKPTVFFGAEGLGLRAKGLSVHVMIAA 125

Query: 125 WHWGAYMGDEALELGIKVRTSSFTRHHVNITMTRAKSNGAYINSMLALQEAISGGADEAL 184
           W  G Y+  EA  LG++  TSS+ RHHVNI++ RAK+NG Y+NS+LAL  A+  G DEA+
Sbjct: 126 WDLGDYVSSEAATLGLRALTSSWARHHVNISLCRAKTNGHYVNSILALNTAVKAGFDEAI 185

Query: 185 MLDPEGYVAEGSGENIFIIKDGVIYTPEVTACLNGITRGTVLTLAAE-HGLKIVEKRITR 243
           MLDPEGYVAE S  N+F+++DG ++TPEVT+CL GITR +V+ LA E  GL++ E+RITR
Sbjct: 186 MLDPEGYVAEASAANVFLLRDGALHTPEVTSCLQGITRDSVIHLAREVLGLEVRERRITR 245

Query: 244 DEVYIADEAFFTGTAAEVTPIREVDGRAIGIGRRGP----------ITEKLQKAYFDLVT 293
           DE+Y ADEAF TGTAAE+ P+RE+DGR IG     P          +T +LQ+ Y  +  
Sbjct: 246 DELYTADEAFVTGTAAEILPLRELDGRHIGARAGAPLPGQPIDANSVTAQLQQLYRQVTR 305

Query: 294 GKTD 297
           G+ +
Sbjct: 306 GELE 309


Lambda     K      H
   0.319    0.135    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 339
Number of extensions: 11
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 322
Length adjustment: 27
Effective length of query: 280
Effective length of database: 295
Effective search space:    82600
Effective search space used:    82600
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)

Align candidate WP_086511983.1 BZY95_RS21775 (branched-chain amino acid transaminase)
to HMM TIGR01122 (ilvE: branched-chain amino acid aminotransferase (EC 2.6.1.42))

Software error:

../bin/blast/fastacmd -i /tmp/list.2573.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.2573.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.